Gene TBFG_12945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12945 
Symbol 
ID5223631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3256918 
End bp3262548 
Gene Length5631 bp 
Protein Length1876 aa 
Translation table11 
GC content65% 
IMG OID640607711 
Productphenolpthiocerol synthesis type-I polyketide synthase ppsA 
Protein accessionYP_001288874 
Protein GI148824120 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.918232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones207 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAA GCATCAGTGG TGAAGCCGAC CTTCGCCACT GGCTAATCGA CTACCTAGTA 
ACCAATATCG GCTGCACACC TGACGAGGTG GACCCCGATC TGTCGCTTGC CGACCTCGGC
GTCAGCTCCC GCGACGCGGT CGTACTGTCC GGCGAACTGT CAGAGCTGCT GGGCAGGACC
GTATCGCCGA TTGACTTCTG GGAGCACCCG ACGATCAACG CGCTGGCCGC GTATCTGGCC
GCACCCGAGC CGAGCCCCGA CTCCGACGCC GCAGTCAAGC GTGGTGCCCG GAACTCACTC
GACGAGCCAA TCGCCGTCGT CGGCATGGGA TGTCGTTTCC CTGGCGGGAT TTCGTGCCCA
GAAGCATTGT GGGACTTTCT CTGTGAACGC CGTTCCTCGA TCAGCCAGGT GCCGCCGCAA
CGATGGCAGC CCTTCGAAGG CGGGCCACCC GAGGTAGCCG CGGCGCTAGC GCGCACTACA
CGGTGGGGCT CATTTTTGCC CGACATCGAC GCCTTCGACG CGGAATTCTT CGAGATCTCC
CCCAGCGAAG CCGACAAGAT GGACCCCCAG CAACGCCTGC TGCTGGAAGT GGCCTGGGAA
GCGTTGGAGC ACGCGGGAAT CCCGCCCGGC ACGCTGCGCC GCTCGGCAAC AGGAGTGTTT
GCCGGGGCAT GCCTGAGCGA ATACGGTGCG ATGGCTTCCG CCGATCTGTC GCAGGTCGAT
GGTTGGAGCA ATAGCGGTGG CGCGATGAGC ATCATCGCCA ACCGCCTCTC GTATTTCCTT
GACCTGCGCG GCCCGTCGGT GGCGGTAGAC ACCGCATGCT CGTCGTCGTT GGTAGCGATC
CACCTGGCCT GCCAGAGCCT TCGGACCCAG GACTGTCACC TGGCAATCGC AGCCGGCGTG
AATTTGTTGT TGTCCCCGGC GGTATTTCGC GGTTTCGACC AAGTCGGCGC CTTGTCCCCG
ACAGGTCAGT GCCGTGCGTT CGATGCGACC GCCGACGGGT TTGTCCGCGG CGAGGGTGCC
GGGGTAGTGG TGCTCAAGCG GTTGACCGAT GCACAGCGCG ACGGGGATCG GGTGCTTGCG
GTGATCTGCG GTTCTGCGGT CAACCAGGAC GGCCGATCCA ACGGGCTGAT GGCCCCCAAC
CCAGCGGCCC AGATGGCGGT GCTGCGTGCC GCCTACACCA ACGCGGGGAT GCAGCCCAGC
GAGGTCGACT ACGTCGAAGC GCACGGAACA GGGACGCTGT TGGGCGACCC GATCGAAGCC
CGCGCTCTCG GAACGGTGCT GGGTCGCGGC CGGCCCGAGG ATTCTCCGTT GCTCATCGGC
TCTGTCAAGA CCAACCTCGG TCACACCGAG GCTGCGGCTG GAATCGCGGG CTTCATCAAG
ACGGTGCTGG CTGTGCAGCA TGGCCAGATT CCGCCAAATC AGCACTTCGA AACCGCGAAC
CCGCACATTC CCTTTACCGA CTTGCGGATG AAAGTCGTTG ACACACAAAC TGAATGGCCG
GCAACGGGCC ATCCCCGCCG TGCCGGTGTG TCGTCGTTCG GCTTCGGTGG CACAAACGCG
CACGTGGTGA TCGAGCAGGG CCAGGAGGTG CGCCCCGCGC CTGGACAAGG CTTAAGTCCG
GCGGTGTCGA CCCTGGTAGT GGCCGGCAAG ACTATGCAGC GGGTGTCCGC GACCGCGGGG
ATGCTAGCCG ATTGGATGGA AGGGCCCGGC GCTGACGTGG CCTTGGCCGA CGTGGCCCAC
ACCCTCAATC ACCACCGATC GCGGCAACCC AAGTTCGGCA CGGTGGTGGC CCGTGACCGT
ACCCAGGCGA TAGCCGGATT GCGTGCGCTG GCCGCCGGCC AACACGCCCC CGGCGTGGTC
AACCCTGCCG AGGGCTCGCC GGGGCCGGGC ACCGTGTTCG TCTACTCCGG CCGCGGTTCA
CAGTGGGCTG GCATGGGCCG TCAATTGTTG GCCGACGAGC CGGCTTTCGC GGCCGCGGTC
GCCGAATTGG AACCGGTGTT TGTCGAGCAA GCCGGCTTTT CGTTGCACGA CGTGCTGGCT
AACGGCGAGG AACTGGTCGG TATCGAGCAG ATTCAGCTCG GGTTGATCGG GATGCAGCTG
GCCCTGACCG AATTATGGTG TTCCTACGGG GTGCGGCCCG ACCTGGTGAT CGGCCACTCC
ATGGGCGAGG TGGCCGCCGC CGTGGTCGCC GGGGCACTGA CCCCGGCCGA GGGTCTGCGG
GTGACCGCCA CCCGGTCACG GCTGATGGCA CCGTTGTCCG GCCAGGGCGG CATGGCACTG
CTGGAACTCG ACGCGCCCAC TACCGAGGCG TTGATTGCCG ACTTCCCACA GGTGACGCTC
GGTATTTACA ACTCACCACG GCAAACGGTG ATCGCCGGGC CCACCGAGCA GATCGATGAG
TTGATCACTC GCGTGCGCGC TAGGGACCGA TTCGCCAGCC GGGTCAATAT CGAAGTGGCC
CCGCACAATC CGGCCATGGA TGCTTTGCAG CCGGCGATGC GTTCGGAGCT GGCCGATCTG
ACCCCACGGA CCCCCACCAT CGGAATCATC TCCACCACCT ACGCAGACTT GCACACCCAA
CCGGTCTTCG ACGCCGAACA CTGGGCCACC AACATGCGCA ACCCCGTGCA TTTCCAGCAG
GCCATCGCTT CCGCCGGTAG CGGCGCCGAC GGCGCCTACC ACACCTTCAT CGAAATCAGC
GCACACCCGC TGCTGACCCA GGCCATCATC GACACTCTGC ACAGCGCTCA ACCCGGAGCC
AGATACACCA GCCTCGGGAC CCTGCAACGC GACACCGACG ACGTCGTGAC CTTCCGGACC
AACCTCAACA AGGCCCACAC CATCCACCCA CCGCACACCC CCCACCCCCC CGAGCCACAT
CCGCCCATCC CCACCACCCC GTGGCAACAC ACCCGTCACT GGATCACCAC CAAATATCCG
GCCGGCTCTG TTGGATCGGC CCCCCGAGCG GGCACACTGC TCGGCCAACA CACCACCGTC
GCCACGGTCT CAGCGAGTCC GCCCTCCCAC CTCTGGCAAG CAAGGCTGGC TCCGGACGCC
AAGCCGTACC AGGGCGGTCA TCGATTCCAC CAAGTCGAGG TGGTCCCAGC TTCTGTTGTG
CTGCACACAA TCCTTTCCGC TGCAACAGAA TTGGGCTACT CCGCGTTGTC CGAGGTCCGA
TTCGAGCAAC CCATTTTCGC CGACCGGCCA CGTCTAATCC AGGTCGTCGC CGACAACCGG
GCGATCAGCC TGGCCTCGAG TCCGGCTGCC GGAACACCCT CAGACCGGTG GACGCGGCAT
GTTACCGCAC AACTTTCCTC GTCACCGTCG GATTCGGCCA GCAGCTTGAA CGAGCACCAT
CGCGCCAACG GGCAGCCGCC CGAACGTGCT CACCGCGACC TGATTCCCGA CCTGGCCGAG
CTGCTCGCAA TGCGCGGCAT CGATGGCCTG CCTTTCTCAT GGACCGTCGC GTCGTGGACA
CAGCACTCGA GCAACCTCAC GGTTGCGATC GATCTCCCCG AAGCTCTGCC CGAAGGGTCG
ACTGGGCCGC TCCTTGACGC CGCGGTGCAC CTCGCCGCGC TATCGGACGT CGCTGATTCG
CGGCTCTACG TGCCGGCAAG CATCGAGCAG ATATCGCTCG GCGATGTCGT CACCGGGCCG
CGTAGCTCGG TGACGCTGAA CCGCACCGCT CACGACGACG ACGGGATCAC CGTCGATGTC
ACCGTTGCAG CCCACGGCGA AGTGCCGTCC CTGTCGATGA GGTCGCTTCG ATACCGGGCT
CTGGACTTTG GCCTAGACGT TGGTAGGGCG CAACCGCCCG CGTCGACCGG TCCGGTCGAG
GCCTACTGTG ATGCCACCAA TTTCGTACAC ACGATCGACT GGCAACCGCA GACCGTTCCG
GACGCGACGC ACCCAGGGGC CGAACAGGTA ACCCATCCAG GACCCGTCGC GATAATCGGC
GATGACGGCG CAGCGCTGTG TGAGACCCTC GAAGGGGCGG GCTACCAGCC GGCCGTGATG
TCCGATGGGG TGTCGCAGGC CCGCTACGTC GTTTACGTCG CGGATTCTGA TCCGGCTGGC
GCCGACGAGA CCGACGTCGA CTTCGCCGTC CGGATCTGTA CCGAAATCAC CGGTCTGGTG
CGGACTCTCG CGGAACGCGA TGCGGATAAG CCCGCGGCGC TATGGATCCT CACCCGCGGA
GTTCACGAAT CGGTCGCCCC GTCCGCGCTG CGCCAGAGTT TCCTGTGGGG CCTTGCCGGT
GTCATCGCCG CCGAACATCC CGAGCTGTGG GGCGGACTGG TCGATCTCGC GATCAACGAC
GACTTAGGCG AATTCGGGCC GGCACTTGCC GAACTGCTTG CCAAACCAAG CAAGTCGATC
TTGGTGCGTC GTGACGGCGT GGTGCTCGCC CCGGCCTTGG CTCCCGTCCG TGGCGAGCCG
GCGCGCAAGT CCTTGCAGTG CAGGCCCGAC GCGGCCTACC TCATCACCGG CGGCCTGGGC
GCCCTTGGCC TGCTGATGGC CGATTGGCTC GCCGACCGCG GCGCTCATCG ATTGGTGTTG
ACCGGCCGCA CGCCATTGCC GCCACGGCGG GACTGGCAAC TCGACACCCT CGACACCGAG
CTGCGCCGGA GGATCGACGC GATCCGCGCC CTGGAAATGC GCGGGGTGAC TGTCGAAGCC
GTCGCCGCCG ACGTCGGCTG CCGCGAAGAC GTGCAGGCCC TGTTGGCCGC GCGCGACCGT
GACGGAGCGG CACCGATCCG CGGGATCATC CACGCCGCGG GCATTACCAA CGATCAATTG
GTGACGAGCA TGACCGGCGA TGCGGTGCGA CAGGTTATGT GGCCGAAGAT CGGCGGCAGC
CAGGTCCTAC ACGACGCATT TCCGCCCGGC AGCGTGGACT TCTTCTACTT GACCGCCTCG
GCTGCCGGGA TATTCGGCAT TCCAGGGCAG GGTTCCTACG CCGCCGCCAA TTCCTACTTG
GACGCGCTGG CGCGGGCGCG CCGGCAACAG GGCTGCCACA CCATGAGCCT CGACTGGGTA
GCCTGGCGGG GGCTCGGATT GGCCGCGGAC GCCCAGCTCG TCAGCGAAGA GCTAGCGCGA
ATGGGTTCGC GTGACATCAC GCCGTCGGAG GCATTCACCG CTTGGGAATT CGTCGATGGC
TACGACGTCG CGCAAGCGGT CGTGGTGCCC ATGCCCGCTC CGGCGGGCGC CGATGGATCC
GGTGCGAACG CTTACCTATT GCCGGCGCGG AACTGGTCGG TGATGGCAGC GACCGAGGTG
CGATCCGAGC TCGAACAGGG GTTACGCCGC ATCATTGCAG CCGAGCTGCG AGTGCCTGAG
AAAGAGCTGG ACACCGACCG CCCGTTCGCC GAGTTGGGTC TCAATTCCCT TATGGCAATG
GCGATTCGGC GCGAGGCCGA GCAGTTTGTC GGCATCGAGT TGTCTGCCAC CATGTTGTTC
AACCACCCAA CGGTCAAATC ACTCGCCAGC TACCTTGCCA AACGTGTGGC ACCGCACGAT
GTGTCACAAG ACAACCAGAT TTCCGCGCTA TCCTCGTCGG CCGGAAGTGT GTTGGACAGT
CTATTCGATC GCATCGAATC GGCGCCGCCT GAGGCCGAGA GGTCGGTGTG A
 
Protein sequence
MTGSISGEAD LRHWLIDYLV TNIGCTPDEV DPDLSLADLG VSSRDAVVLS GELSELLGRT 
VSPIDFWEHP TINALAAYLA APEPSPDSDA AVKRGARNSL DEPIAVVGMG CRFPGGISCP
EALWDFLCER RSSISQVPPQ RWQPFEGGPP EVAAALARTT RWGSFLPDID AFDAEFFEIS
PSEADKMDPQ QRLLLEVAWE ALEHAGIPPG TLRRSATGVF AGACLSEYGA MASADLSQVD
GWSNSGGAMS IIANRLSYFL DLRGPSVAVD TACSSSLVAI HLACQSLRTQ DCHLAIAAGV
NLLLSPAVFR GFDQVGALSP TGQCRAFDAT ADGFVRGEGA GVVVLKRLTD AQRDGDRVLA
VICGSAVNQD GRSNGLMAPN PAAQMAVLRA AYTNAGMQPS EVDYVEAHGT GTLLGDPIEA
RALGTVLGRG RPEDSPLLIG SVKTNLGHTE AAAGIAGFIK TVLAVQHGQI PPNQHFETAN
PHIPFTDLRM KVVDTQTEWP ATGHPRRAGV SSFGFGGTNA HVVIEQGQEV RPAPGQGLSP
AVSTLVVAGK TMQRVSATAG MLADWMEGPG ADVALADVAH TLNHHRSRQP KFGTVVARDR
TQAIAGLRAL AAGQHAPGVV NPAEGSPGPG TVFVYSGRGS QWAGMGRQLL ADEPAFAAAV
AELEPVFVEQ AGFSLHDVLA NGEELVGIEQ IQLGLIGMQL ALTELWCSYG VRPDLVIGHS
MGEVAAAVVA GALTPAEGLR VTATRSRLMA PLSGQGGMAL LELDAPTTEA LIADFPQVTL
GIYNSPRQTV IAGPTEQIDE LITRVRARDR FASRVNIEVA PHNPAMDALQ PAMRSELADL
TPRTPTIGII STTYADLHTQ PVFDAEHWAT NMRNPVHFQQ AIASAGSGAD GAYHTFIEIS
AHPLLTQAII DTLHSAQPGA RYTSLGTLQR DTDDVVTFRT NLNKAHTIHP PHTPHPPEPH
PPIPTTPWQH TRHWITTKYP AGSVGSAPRA GTLLGQHTTV ATVSASPPSH LWQARLAPDA
KPYQGGHRFH QVEVVPASVV LHTILSAATE LGYSALSEVR FEQPIFADRP RLIQVVADNR
AISLASSPAA GTPSDRWTRH VTAQLSSSPS DSASSLNEHH RANGQPPERA HRDLIPDLAE
LLAMRGIDGL PFSWTVASWT QHSSNLTVAI DLPEALPEGS TGPLLDAAVH LAALSDVADS
RLYVPASIEQ ISLGDVVTGP RSSVTLNRTA HDDDGITVDV TVAAHGEVPS LSMRSLRYRA
LDFGLDVGRA QPPASTGPVE AYCDATNFVH TIDWQPQTVP DATHPGAEQV THPGPVAIIG
DDGAALCETL EGAGYQPAVM SDGVSQARYV VYVADSDPAG ADETDVDFAV RICTEITGLV
RTLAERDADK PAALWILTRG VHESVAPSAL RQSFLWGLAG VIAAEHPELW GGLVDLAIND
DLGEFGPALA ELLAKPSKSI LVRRDGVVLA PALAPVRGEP ARKSLQCRPD AAYLITGGLG
ALGLLMADWL ADRGAHRLVL TGRTPLPPRR DWQLDTLDTE LRRRIDAIRA LEMRGVTVEA
VAADVGCRED VQALLAARDR DGAAPIRGII HAAGITNDQL VTSMTGDAVR QVMWPKIGGS
QVLHDAFPPG SVDFFYLTAS AAGIFGIPGQ GSYAAANSYL DALARARRQQ GCHTMSLDWV
AWRGLGLAAD AQLVSEELAR MGSRDITPSE AFTAWEFVDG YDVAQAVVVP MPAPAGADGS
GANAYLLPAR NWSVMAATEV RSELEQGLRR IIAAELRVPE KELDTDRPFA ELGLNSLMAM
AIRREAEQFV GIELSATMLF NHPTVKSLAS YLAKRVAPHD VSQDNQISAL SSSAGSVLDS
LFDRIESAPP EAERSV