Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12945 |
Symbol | |
ID | 5223631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3256918 |
End bp | 3262548 |
Gene Length | 5631 bp |
Protein Length | 1876 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640607711 |
Product | phenolpthiocerol synthesis type-I polyketide synthase ppsA |
Protein accession | YP_001288874 |
Protein GI | 148824120 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.918232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 207 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAA GCATCAGTGG TGAAGCCGAC CTTCGCCACT GGCTAATCGA CTACCTAGTA ACCAATATCG GCTGCACACC TGACGAGGTG GACCCCGATC TGTCGCTTGC CGACCTCGGC GTCAGCTCCC GCGACGCGGT CGTACTGTCC GGCGAACTGT CAGAGCTGCT GGGCAGGACC GTATCGCCGA TTGACTTCTG GGAGCACCCG ACGATCAACG CGCTGGCCGC GTATCTGGCC GCACCCGAGC CGAGCCCCGA CTCCGACGCC GCAGTCAAGC GTGGTGCCCG GAACTCACTC GACGAGCCAA TCGCCGTCGT CGGCATGGGA TGTCGTTTCC CTGGCGGGAT TTCGTGCCCA GAAGCATTGT GGGACTTTCT CTGTGAACGC CGTTCCTCGA TCAGCCAGGT GCCGCCGCAA CGATGGCAGC CCTTCGAAGG CGGGCCACCC GAGGTAGCCG CGGCGCTAGC GCGCACTACA CGGTGGGGCT CATTTTTGCC CGACATCGAC GCCTTCGACG CGGAATTCTT CGAGATCTCC CCCAGCGAAG CCGACAAGAT GGACCCCCAG CAACGCCTGC TGCTGGAAGT GGCCTGGGAA GCGTTGGAGC ACGCGGGAAT CCCGCCCGGC ACGCTGCGCC GCTCGGCAAC AGGAGTGTTT GCCGGGGCAT GCCTGAGCGA ATACGGTGCG ATGGCTTCCG CCGATCTGTC GCAGGTCGAT GGTTGGAGCA ATAGCGGTGG CGCGATGAGC ATCATCGCCA ACCGCCTCTC GTATTTCCTT GACCTGCGCG GCCCGTCGGT GGCGGTAGAC ACCGCATGCT CGTCGTCGTT GGTAGCGATC CACCTGGCCT GCCAGAGCCT TCGGACCCAG GACTGTCACC TGGCAATCGC AGCCGGCGTG AATTTGTTGT TGTCCCCGGC GGTATTTCGC GGTTTCGACC AAGTCGGCGC CTTGTCCCCG ACAGGTCAGT GCCGTGCGTT CGATGCGACC GCCGACGGGT TTGTCCGCGG CGAGGGTGCC GGGGTAGTGG TGCTCAAGCG GTTGACCGAT GCACAGCGCG ACGGGGATCG GGTGCTTGCG GTGATCTGCG GTTCTGCGGT CAACCAGGAC GGCCGATCCA ACGGGCTGAT GGCCCCCAAC CCAGCGGCCC AGATGGCGGT GCTGCGTGCC GCCTACACCA ACGCGGGGAT GCAGCCCAGC GAGGTCGACT ACGTCGAAGC GCACGGAACA GGGACGCTGT TGGGCGACCC GATCGAAGCC CGCGCTCTCG GAACGGTGCT GGGTCGCGGC CGGCCCGAGG ATTCTCCGTT GCTCATCGGC TCTGTCAAGA CCAACCTCGG TCACACCGAG GCTGCGGCTG GAATCGCGGG CTTCATCAAG ACGGTGCTGG CTGTGCAGCA TGGCCAGATT CCGCCAAATC AGCACTTCGA AACCGCGAAC CCGCACATTC CCTTTACCGA CTTGCGGATG AAAGTCGTTG ACACACAAAC TGAATGGCCG GCAACGGGCC ATCCCCGCCG TGCCGGTGTG TCGTCGTTCG GCTTCGGTGG CACAAACGCG CACGTGGTGA TCGAGCAGGG CCAGGAGGTG CGCCCCGCGC CTGGACAAGG CTTAAGTCCG GCGGTGTCGA CCCTGGTAGT GGCCGGCAAG ACTATGCAGC GGGTGTCCGC GACCGCGGGG ATGCTAGCCG ATTGGATGGA AGGGCCCGGC GCTGACGTGG CCTTGGCCGA CGTGGCCCAC ACCCTCAATC ACCACCGATC GCGGCAACCC AAGTTCGGCA CGGTGGTGGC CCGTGACCGT ACCCAGGCGA TAGCCGGATT GCGTGCGCTG GCCGCCGGCC AACACGCCCC CGGCGTGGTC AACCCTGCCG AGGGCTCGCC GGGGCCGGGC ACCGTGTTCG TCTACTCCGG CCGCGGTTCA CAGTGGGCTG GCATGGGCCG TCAATTGTTG GCCGACGAGC CGGCTTTCGC GGCCGCGGTC GCCGAATTGG AACCGGTGTT TGTCGAGCAA GCCGGCTTTT CGTTGCACGA CGTGCTGGCT AACGGCGAGG AACTGGTCGG TATCGAGCAG ATTCAGCTCG GGTTGATCGG GATGCAGCTG GCCCTGACCG AATTATGGTG TTCCTACGGG GTGCGGCCCG ACCTGGTGAT CGGCCACTCC ATGGGCGAGG TGGCCGCCGC CGTGGTCGCC GGGGCACTGA CCCCGGCCGA GGGTCTGCGG GTGACCGCCA CCCGGTCACG GCTGATGGCA CCGTTGTCCG GCCAGGGCGG CATGGCACTG CTGGAACTCG ACGCGCCCAC TACCGAGGCG TTGATTGCCG ACTTCCCACA GGTGACGCTC GGTATTTACA ACTCACCACG GCAAACGGTG ATCGCCGGGC CCACCGAGCA GATCGATGAG TTGATCACTC GCGTGCGCGC TAGGGACCGA TTCGCCAGCC GGGTCAATAT CGAAGTGGCC CCGCACAATC CGGCCATGGA TGCTTTGCAG CCGGCGATGC GTTCGGAGCT GGCCGATCTG ACCCCACGGA CCCCCACCAT CGGAATCATC TCCACCACCT ACGCAGACTT GCACACCCAA CCGGTCTTCG ACGCCGAACA CTGGGCCACC AACATGCGCA ACCCCGTGCA TTTCCAGCAG GCCATCGCTT CCGCCGGTAG CGGCGCCGAC GGCGCCTACC ACACCTTCAT CGAAATCAGC GCACACCCGC TGCTGACCCA GGCCATCATC GACACTCTGC ACAGCGCTCA ACCCGGAGCC AGATACACCA GCCTCGGGAC CCTGCAACGC GACACCGACG ACGTCGTGAC CTTCCGGACC AACCTCAACA AGGCCCACAC CATCCACCCA CCGCACACCC CCCACCCCCC CGAGCCACAT CCGCCCATCC CCACCACCCC GTGGCAACAC ACCCGTCACT GGATCACCAC CAAATATCCG GCCGGCTCTG TTGGATCGGC CCCCCGAGCG GGCACACTGC TCGGCCAACA CACCACCGTC GCCACGGTCT CAGCGAGTCC GCCCTCCCAC CTCTGGCAAG CAAGGCTGGC TCCGGACGCC AAGCCGTACC AGGGCGGTCA TCGATTCCAC CAAGTCGAGG TGGTCCCAGC TTCTGTTGTG CTGCACACAA TCCTTTCCGC TGCAACAGAA TTGGGCTACT CCGCGTTGTC CGAGGTCCGA TTCGAGCAAC CCATTTTCGC CGACCGGCCA CGTCTAATCC AGGTCGTCGC CGACAACCGG GCGATCAGCC TGGCCTCGAG TCCGGCTGCC GGAACACCCT CAGACCGGTG GACGCGGCAT GTTACCGCAC AACTTTCCTC GTCACCGTCG GATTCGGCCA GCAGCTTGAA CGAGCACCAT CGCGCCAACG GGCAGCCGCC CGAACGTGCT CACCGCGACC TGATTCCCGA CCTGGCCGAG CTGCTCGCAA TGCGCGGCAT CGATGGCCTG CCTTTCTCAT GGACCGTCGC GTCGTGGACA CAGCACTCGA GCAACCTCAC GGTTGCGATC GATCTCCCCG AAGCTCTGCC CGAAGGGTCG ACTGGGCCGC TCCTTGACGC CGCGGTGCAC CTCGCCGCGC TATCGGACGT CGCTGATTCG CGGCTCTACG TGCCGGCAAG CATCGAGCAG ATATCGCTCG GCGATGTCGT CACCGGGCCG CGTAGCTCGG TGACGCTGAA CCGCACCGCT CACGACGACG ACGGGATCAC CGTCGATGTC ACCGTTGCAG CCCACGGCGA AGTGCCGTCC CTGTCGATGA GGTCGCTTCG ATACCGGGCT CTGGACTTTG GCCTAGACGT TGGTAGGGCG CAACCGCCCG CGTCGACCGG TCCGGTCGAG GCCTACTGTG ATGCCACCAA TTTCGTACAC ACGATCGACT GGCAACCGCA GACCGTTCCG GACGCGACGC ACCCAGGGGC CGAACAGGTA ACCCATCCAG GACCCGTCGC GATAATCGGC GATGACGGCG CAGCGCTGTG TGAGACCCTC GAAGGGGCGG GCTACCAGCC GGCCGTGATG TCCGATGGGG TGTCGCAGGC CCGCTACGTC GTTTACGTCG CGGATTCTGA TCCGGCTGGC GCCGACGAGA CCGACGTCGA CTTCGCCGTC CGGATCTGTA CCGAAATCAC CGGTCTGGTG CGGACTCTCG CGGAACGCGA TGCGGATAAG CCCGCGGCGC TATGGATCCT CACCCGCGGA GTTCACGAAT CGGTCGCCCC GTCCGCGCTG CGCCAGAGTT TCCTGTGGGG CCTTGCCGGT GTCATCGCCG CCGAACATCC CGAGCTGTGG GGCGGACTGG TCGATCTCGC GATCAACGAC GACTTAGGCG AATTCGGGCC GGCACTTGCC GAACTGCTTG CCAAACCAAG CAAGTCGATC TTGGTGCGTC GTGACGGCGT GGTGCTCGCC CCGGCCTTGG CTCCCGTCCG TGGCGAGCCG GCGCGCAAGT CCTTGCAGTG CAGGCCCGAC GCGGCCTACC TCATCACCGG CGGCCTGGGC GCCCTTGGCC TGCTGATGGC CGATTGGCTC GCCGACCGCG GCGCTCATCG ATTGGTGTTG ACCGGCCGCA CGCCATTGCC GCCACGGCGG GACTGGCAAC TCGACACCCT CGACACCGAG CTGCGCCGGA GGATCGACGC GATCCGCGCC CTGGAAATGC GCGGGGTGAC TGTCGAAGCC GTCGCCGCCG ACGTCGGCTG CCGCGAAGAC GTGCAGGCCC TGTTGGCCGC GCGCGACCGT GACGGAGCGG CACCGATCCG CGGGATCATC CACGCCGCGG GCATTACCAA CGATCAATTG GTGACGAGCA TGACCGGCGA TGCGGTGCGA CAGGTTATGT GGCCGAAGAT CGGCGGCAGC CAGGTCCTAC ACGACGCATT TCCGCCCGGC AGCGTGGACT TCTTCTACTT GACCGCCTCG GCTGCCGGGA TATTCGGCAT TCCAGGGCAG GGTTCCTACG CCGCCGCCAA TTCCTACTTG GACGCGCTGG CGCGGGCGCG CCGGCAACAG GGCTGCCACA CCATGAGCCT CGACTGGGTA GCCTGGCGGG GGCTCGGATT GGCCGCGGAC GCCCAGCTCG TCAGCGAAGA GCTAGCGCGA ATGGGTTCGC GTGACATCAC GCCGTCGGAG GCATTCACCG CTTGGGAATT CGTCGATGGC TACGACGTCG CGCAAGCGGT CGTGGTGCCC ATGCCCGCTC CGGCGGGCGC CGATGGATCC GGTGCGAACG CTTACCTATT GCCGGCGCGG AACTGGTCGG TGATGGCAGC GACCGAGGTG CGATCCGAGC TCGAACAGGG GTTACGCCGC ATCATTGCAG CCGAGCTGCG AGTGCCTGAG AAAGAGCTGG ACACCGACCG CCCGTTCGCC GAGTTGGGTC TCAATTCCCT TATGGCAATG GCGATTCGGC GCGAGGCCGA GCAGTTTGTC GGCATCGAGT TGTCTGCCAC CATGTTGTTC AACCACCCAA CGGTCAAATC ACTCGCCAGC TACCTTGCCA AACGTGTGGC ACCGCACGAT GTGTCACAAG ACAACCAGAT TTCCGCGCTA TCCTCGTCGG CCGGAAGTGT GTTGGACAGT CTATTCGATC GCATCGAATC GGCGCCGCCT GAGGCCGAGA GGTCGGTGTG A
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Protein sequence | MTGSISGEAD LRHWLIDYLV TNIGCTPDEV DPDLSLADLG VSSRDAVVLS GELSELLGRT VSPIDFWEHP TINALAAYLA APEPSPDSDA AVKRGARNSL DEPIAVVGMG CRFPGGISCP EALWDFLCER RSSISQVPPQ RWQPFEGGPP EVAAALARTT RWGSFLPDID AFDAEFFEIS PSEADKMDPQ QRLLLEVAWE ALEHAGIPPG TLRRSATGVF AGACLSEYGA MASADLSQVD GWSNSGGAMS IIANRLSYFL DLRGPSVAVD TACSSSLVAI HLACQSLRTQ DCHLAIAAGV NLLLSPAVFR GFDQVGALSP TGQCRAFDAT ADGFVRGEGA GVVVLKRLTD AQRDGDRVLA VICGSAVNQD GRSNGLMAPN PAAQMAVLRA AYTNAGMQPS EVDYVEAHGT GTLLGDPIEA RALGTVLGRG RPEDSPLLIG SVKTNLGHTE AAAGIAGFIK TVLAVQHGQI PPNQHFETAN PHIPFTDLRM KVVDTQTEWP ATGHPRRAGV SSFGFGGTNA HVVIEQGQEV RPAPGQGLSP AVSTLVVAGK TMQRVSATAG MLADWMEGPG ADVALADVAH TLNHHRSRQP KFGTVVARDR TQAIAGLRAL AAGQHAPGVV NPAEGSPGPG TVFVYSGRGS QWAGMGRQLL ADEPAFAAAV AELEPVFVEQ AGFSLHDVLA NGEELVGIEQ IQLGLIGMQL ALTELWCSYG VRPDLVIGHS MGEVAAAVVA GALTPAEGLR VTATRSRLMA PLSGQGGMAL LELDAPTTEA LIADFPQVTL GIYNSPRQTV IAGPTEQIDE LITRVRARDR FASRVNIEVA PHNPAMDALQ PAMRSELADL TPRTPTIGII STTYADLHTQ PVFDAEHWAT NMRNPVHFQQ AIASAGSGAD GAYHTFIEIS AHPLLTQAII DTLHSAQPGA RYTSLGTLQR DTDDVVTFRT NLNKAHTIHP PHTPHPPEPH PPIPTTPWQH TRHWITTKYP AGSVGSAPRA GTLLGQHTTV ATVSASPPSH LWQARLAPDA KPYQGGHRFH QVEVVPASVV LHTILSAATE LGYSALSEVR FEQPIFADRP RLIQVVADNR AISLASSPAA GTPSDRWTRH VTAQLSSSPS DSASSLNEHH RANGQPPERA HRDLIPDLAE LLAMRGIDGL PFSWTVASWT QHSSNLTVAI DLPEALPEGS TGPLLDAAVH LAALSDVADS RLYVPASIEQ ISLGDVVTGP RSSVTLNRTA HDDDGITVDV TVAAHGEVPS LSMRSLRYRA LDFGLDVGRA QPPASTGPVE AYCDATNFVH TIDWQPQTVP DATHPGAEQV THPGPVAIIG DDGAALCETL EGAGYQPAVM SDGVSQARYV VYVADSDPAG ADETDVDFAV RICTEITGLV RTLAERDADK PAALWILTRG VHESVAPSAL RQSFLWGLAG VIAAEHPELW GGLVDLAIND DLGEFGPALA ELLAKPSKSI LVRRDGVVLA PALAPVRGEP ARKSLQCRPD AAYLITGGLG ALGLLMADWL ADRGAHRLVL TGRTPLPPRR DWQLDTLDTE LRRRIDAIRA LEMRGVTVEA VAADVGCRED VQALLAARDR DGAAPIRGII HAAGITNDQL VTSMTGDAVR QVMWPKIGGS QVLHDAFPPG SVDFFYLTAS AAGIFGIPGQ GSYAAANSYL DALARARRQQ GCHTMSLDWV AWRGLGLAAD AQLVSEELAR MGSRDITPSE AFTAWEFVDG YDVAQAVVVP MPAPAGADGS GANAYLLPAR NWSVMAATEV RSELEQGLRR IIAAELRVPE KELDTDRPFA ELGLNSLMAM AIRREAEQFV GIELSATMLF NHPTVKSLAS YLAKRVAPHD VSQDNQISAL SSSAGSVLDS LFDRIESAPP EAERSV
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