Gene TBFG_12906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12906 
Symbol 
ID5223592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3212323 
End bp3213549 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID640607672 
ProductPPE family protein 
Protein accessionYP_001288835 
Protein GI148824081 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones273 
Plasmid unclonability p-value0.00379008 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones217 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTTTG GGGTGTTGCC GCCCGAGATC AACTCCGGTC GAATGTACGC AGGTCCGGGA 
TCGGGGCCCA TGATGGCCGC CGCGGCGGCC TGGGATAGTT TGGCGGCTGA ATTGGGCTTG
GCCGCCGGCG GCTACCGGTT GGCTATCTCG GAGCTGACCG GTGCGTACTG GGCGGGGCCC
GCAGCGGCGT CGATGGTGGC CGCGGTCACG CCTTATGTGG CGTGGCTCAG CGCCACCGCC
GGTCAGGCTG AACAGGCGGG CATGCAGGCC AGAGCGGCCG CGGCAGCCTA TGAGCTGGCG
TTTGCGATGA CGGTGCCCCC GCCGGTGGTC GTTGCCAACC GCGCGCTGTT GGTGGCGCTG
GTCGCGACCA ACTTTTTCGG GCAGAACACC CCGGCGATCG CGGCCACCGA GGCCCAATAC
GCCGAGATGT GGGCCCAAGA CGCTGCCGCC ATGTACGCCT ATGCGGGCTC CGCGGCAATC
GCCACGGAGT TGACCCCGTT CACCGCGGCG CCAGTGACTA CCAGCCCTGC CGCGCTGGCC
GGCCAGGCGG CGGCGACGGT ATCGTCGACG GTCCCACCGC TGGCCACCAC CGCCGCGGTG
CCCCAACTGT TGCAGCAACT CTCGTCGACG TCACTGATCC CGTGGTACTC GGCATTGCAG
CAATGGCTCG CGGAGAATCT TCTCGGTCTC ACGCCTGACA ACAGGATGAC GATCGTTCGG
TTGCTGGGCA TCAGCTACTT CGACGAAGGG CTACTGCAAT TCGAGGCTTC GCTCGCCCAG
CAAGCGATCC CGGGCACCCC GGGCGGCGCC GGTGACTCGG GATCCTCGGT GCTTGACAGC
TGGGGTCCAA CCATCTTCGC CGGCCCGCGG GCGAGCCCAA GTGTGGCAGG CGGCGGTGCT
GTTGGCGGGG TTCAGACGCC CCAGCCGTAC TGGTACTGGG CACTAGACCG AGAAAGCATT
GGCGGATCGG TATCGGCCGC TTTGGGGAAG GGGAGCTCGG CTGGTTCATT GTCGGTGCCA
CCCGATTGGG CCGCCCGCGC TCGATGGGCA AACCCAGCGG CCTGGCGGTT GCCGGGCGAC
GATGTCACCG CCCTGCGCGG CACCGCGGAA AACGCCCTGC TTCGGGGATT TCCGATGGCC
AGCGCCGGCC AGAGCACCGG CGGCGGCTTC GTTCACAAAT ACGGGTTCCG CTTGGCGGTA
ATGCAGCGTC CGCCCTTCGC TGGATAG
 
Protein sequence
MDFGVLPPEI NSGRMYAGPG SGPMMAAAAA WDSLAAELGL AAGGYRLAIS ELTGAYWAGP 
AAASMVAAVT PYVAWLSATA GQAEQAGMQA RAAAAAYELA FAMTVPPPVV VANRALLVAL
VATNFFGQNT PAIAATEAQY AEMWAQDAAA MYAYAGSAAI ATELTPFTAA PVTTSPAALA
GQAAATVSST VPPLATTAAV PQLLQQLSST SLIPWYSALQ QWLAENLLGL TPDNRMTIVR
LLGISYFDEG LLQFEASLAQ QAIPGTPGGA GDSGSSVLDS WGPTIFAGPR ASPSVAGGGA
VGGVQTPQPY WYWALDRESI GGSVSAALGK GSSAGSLSVP PDWAARARWA NPAAWRLPGD
DVTALRGTAE NALLRGFPMA SAGQSTGGGF VHKYGFRLAV MQRPPFAG