Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12906 |
Symbol | |
ID | 5223592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3212323 |
End bp | 3213549 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640607672 |
Product | PPE family protein |
Protein accession | YP_001288835 |
Protein GI | 148824081 |
COG category | [N] Cell motility |
COG ID | [COG5651] PPE-repeat proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 273 |
Plasmid unclonability p-value | 0.00379008 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 217 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTTTG GGGTGTTGCC GCCCGAGATC AACTCCGGTC GAATGTACGC AGGTCCGGGA TCGGGGCCCA TGATGGCCGC CGCGGCGGCC TGGGATAGTT TGGCGGCTGA ATTGGGCTTG GCCGCCGGCG GCTACCGGTT GGCTATCTCG GAGCTGACCG GTGCGTACTG GGCGGGGCCC GCAGCGGCGT CGATGGTGGC CGCGGTCACG CCTTATGTGG CGTGGCTCAG CGCCACCGCC GGTCAGGCTG AACAGGCGGG CATGCAGGCC AGAGCGGCCG CGGCAGCCTA TGAGCTGGCG TTTGCGATGA CGGTGCCCCC GCCGGTGGTC GTTGCCAACC GCGCGCTGTT GGTGGCGCTG GTCGCGACCA ACTTTTTCGG GCAGAACACC CCGGCGATCG CGGCCACCGA GGCCCAATAC GCCGAGATGT GGGCCCAAGA CGCTGCCGCC ATGTACGCCT ATGCGGGCTC CGCGGCAATC GCCACGGAGT TGACCCCGTT CACCGCGGCG CCAGTGACTA CCAGCCCTGC CGCGCTGGCC GGCCAGGCGG CGGCGACGGT ATCGTCGACG GTCCCACCGC TGGCCACCAC CGCCGCGGTG CCCCAACTGT TGCAGCAACT CTCGTCGACG TCACTGATCC CGTGGTACTC GGCATTGCAG CAATGGCTCG CGGAGAATCT TCTCGGTCTC ACGCCTGACA ACAGGATGAC GATCGTTCGG TTGCTGGGCA TCAGCTACTT CGACGAAGGG CTACTGCAAT TCGAGGCTTC GCTCGCCCAG CAAGCGATCC CGGGCACCCC GGGCGGCGCC GGTGACTCGG GATCCTCGGT GCTTGACAGC TGGGGTCCAA CCATCTTCGC CGGCCCGCGG GCGAGCCCAA GTGTGGCAGG CGGCGGTGCT GTTGGCGGGG TTCAGACGCC CCAGCCGTAC TGGTACTGGG CACTAGACCG AGAAAGCATT GGCGGATCGG TATCGGCCGC TTTGGGGAAG GGGAGCTCGG CTGGTTCATT GTCGGTGCCA CCCGATTGGG CCGCCCGCGC TCGATGGGCA AACCCAGCGG CCTGGCGGTT GCCGGGCGAC GATGTCACCG CCCTGCGCGG CACCGCGGAA AACGCCCTGC TTCGGGGATT TCCGATGGCC AGCGCCGGCC AGAGCACCGG CGGCGGCTTC GTTCACAAAT ACGGGTTCCG CTTGGCGGTA ATGCAGCGTC CGCCCTTCGC TGGATAG
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Protein sequence | MDFGVLPPEI NSGRMYAGPG SGPMMAAAAA WDSLAAELGL AAGGYRLAIS ELTGAYWAGP AAASMVAAVT PYVAWLSATA GQAEQAGMQA RAAAAAYELA FAMTVPPPVV VANRALLVAL VATNFFGQNT PAIAATEAQY AEMWAQDAAA MYAYAGSAAI ATELTPFTAA PVTTSPAALA GQAAATVSST VPPLATTAAV PQLLQQLSST SLIPWYSALQ QWLAENLLGL TPDNRMTIVR LLGISYFDEG LLQFEASLAQ QAIPGTPGGA GDSGSSVLDS WGPTIFAGPR ASPSVAGGGA VGGVQTPQPY WYWALDRESI GGSVSAALGK GSSAGSLSVP PDWAARARWA NPAAWRLPGD DVTALRGTAE NALLRGFPMA SAGQSTGGGF VHKYGFRLAV MQRPPFAG
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