Gene TBFG_12792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12792 
Symbol 
ID5223478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3098170 
End bp3098709 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID640607558 
ProductLrp/Asn family transcriptional regulator 
Protein accessionYP_001288721 
Protein GI148823967 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones396 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones205 
Fosmid unclonability p-value0.580591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATTC TTTTTCGAGG CCATATGCGT GATAATTCAA CGGAACACAA GACTCGCCGG 
GCTGCCTCGT CGAAGGATGT TCGACCCGCT GAACTTGATG AGGTGGACCG CAGAATCCTG
AGCTTGCTGC ATGGCGATGC CAGAATGCCC AACAACGCGT TAGCGGACAC TGTCGGGATA
GCGCCGTCGA CGTGTCACGG CCGGGTTCGG CGGTTGGTGG ACCTCGGCGT GATCCGGGGG
TTCTACACCG ACATCGACCC GGTCGCGGTG GGTTTGCCGT TGCAGGCGAT GATCTCGGTC
AACTTGCAGT CGTCCGCTCG CGGGAAAATC CGCAGCTTCA TCCAGCAGAT CCGCCGCAAA
CGGCAGGTGA TGGATGTCTA CTTTCTGGCC GGCGCCGACG ATTTCATCTT GCACGTCGCC
GCTCGCGACA CCGAGGACCT GCGTTCGTTC GTGGTCGAAA ACCTCAATGC CGACGCCGAC
GTCGCAGGTA CCCAGACGTC CCTGATCTTC GAGCATCTGC GCGGGGCGGC GCCCATCTAG
 
Protein sequence
MIILFRGHMR DNSTEHKTRR AASSKDVRPA ELDEVDRRIL SLLHGDARMP NNALADTVGI 
APSTCHGRVR RLVDLGVIRG FYTDIDPVAV GLPLQAMISV NLQSSARGKI RSFIQQIRRK
RQVMDVYFLA GADDFILHVA ARDTEDLRSF VVENLNADAD VAGTQTSLIF EHLRGAAPI