Gene TBFG_12746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12746 
Symbol 
ID5223432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3056941 
End bp3058479 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content70% 
IMG OID640607512 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_001288675 
Protein GI148823921 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones243 
Plasmid unclonability p-value0.000618798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones194 
Fosmid unclonability p-value0.207012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGC ACGATGCCGC CGCGGGGGTG ACCGGCGAGG GCGCCGGGCC GCCCGTGCGG 
CGAGCGCCAG CGCGCACCTA TCAGGTCCGC ACCTACGGCT GTCAGATGAA CGTCCACGAC
TCCGAGCGGC TGGCGGGTCT GCTGGAAGCG GCCGGCTACC GGAGGGCGAC CGACGGTTCC
GAGGCCGACG TCGTGGTGTT CAACACCTGC GCCGTCCGCG AGAACGCCGA CAACAGGCTG
TACGGCAACC TCAGCCATCT GGCCCCGCGC AAGCGCGCCA ATCCCGACAT GCAAATCGCG
GTCGGTGGCT GCCTGGCGCA AAAAGACCGC GACGCCGTGC TGCGCAGGGC GCCGTGGGTA
GACGTTGTCT TCGGCACCCA CAACATCGGG TCTTTGCCCA CGCTGCTGGA GCGCGCCCGG
CACAACAAGG TCGCCCAGGT CGAAATCGCC GAGGCGCTGC AACAGTTCCC GTCGTCGCTG
CCCAGCTCCC GCGAATCTGC CTATGCCGCG TGGGTTTCCA TCTCGGTGGG CTGCAACAAC
AGCTGCACGT TCTGCATCGT CCCGTCGCTG CGGGGTAGGG AGGTCGACCG CAGCCCGGCA
GACATCCTGG CCGAGGTGCG GTCCTTGGTG AACGACGGTG TGCTCGAAGT CACCCTGCTC
GGCCAAAACG TCAACGCCTA CGGCGTCTCG TTCGCCGACC CCGCATTGCC CCGTAATCGG
GGAGCTTTCG CCGAGTTGCT GCGGGCCTGC GGAGACATCG ACGGGCTGGA GCGGGTCCGG
TTCACCTCCC CACACCCGGC CGAATTCACC GACGACGTCA TCGAGGCGAT GGCGCAGACG
CGCAACGTCT GCCCCGCGCT GCACATGCCG CTACAGTCCG GATCCGACCG GATCCTGCGC
GCGATGCGGC GGTCCTATCG TGCCGAGCGC TACCTCGGCA TCATCGAGCG CGTGCGGGCG
GCCATCCCGC ATGCCGCGAT TACCACCGAT CTGATCGTCG GTTTCCCCGG GGAGACCGAA
GAGGACTTCG CGGCCACGCT CGACGTGGTG CGCCGGGCCC GCTTCGCGGC CGCATTTACC
TTCCAATACT CCAAGCGGCC CGGGACACCG GCCGCGCAAC TCGACGGACA GCTGCCGAAA
GCCGTTGTGC AGGAACGCTA TGAACGCCTG ATCGCGCTGC AGGAGCAAAT CTCGCTGGAA
GCCAACCGCG CCCTGGTCGG GCAGGCCGTC GAGGTGCTGG TGGCCACCGG GGAAGGGCGC
AAGGACACCG TCACGGCGCG CATGAGCGGG CGGGCGCGCG ACGGGCGCCT GGTGCACTTC
ACCGCCGGCC AGCCGCGCGT GCGTCCCGGC GACGTCATCA CCACGAAGGT CACCGAAGCG
GCGCCGCACC ACCTCATCGC CGACGCCGGC GTCCTGACCC ACCGCCGCAC CCGCGCCGGC
GACGCGCACA CCGCCGGGCA GCCGGGGCGC GCCGTCGGCC TGGGCATGCC TGGGGTCGGG
CTGCCGGTCA GCGCGGCCAA GCCCGGAGGA TGCAGATGA
 
Protein sequence
MVAHDAAAGV TGEGAGPPVR RAPARTYQVR TYGCQMNVHD SERLAGLLEA AGYRRATDGS 
EADVVVFNTC AVRENADNRL YGNLSHLAPR KRANPDMQIA VGGCLAQKDR DAVLRRAPWV
DVVFGTHNIG SLPTLLERAR HNKVAQVEIA EALQQFPSSL PSSRESAYAA WVSISVGCNN
SCTFCIVPSL RGREVDRSPA DILAEVRSLV NDGVLEVTLL GQNVNAYGVS FADPALPRNR
GAFAELLRAC GDIDGLERVR FTSPHPAEFT DDVIEAMAQT RNVCPALHMP LQSGSDRILR
AMRRSYRAER YLGIIERVRA AIPHAAITTD LIVGFPGETE EDFAATLDVV RRARFAAAFT
FQYSKRPGTP AAQLDGQLPK AVVQERYERL IALQEQISLE ANRALVGQAV EVLVATGEGR
KDTVTARMSG RARDGRLVHF TAGQPRVRPG DVITTKVTEA APHHLIADAG VLTHRRTRAG
DAHTAGQPGR AVGLGMPGVG LPVSAAKPGG CR