Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12718 |
Symbol | |
ID | 5223404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3029790 |
End bp | 3031376 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640607484 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001288647 |
Protein GI | 148823893 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 336 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 216 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGCGA CCAAAGCAAG CACGGCGACC GATGAGCCGG TAAAACGCAC CGCCACCAAG TCGCCCGCGG CTTCCGCGTC CGGGGCCAAG ACCGGCGCCA AGCGAACAGC GGCGAAGTCC GCTAGTGGCT CCCCACCCGC GAAGCGGGCT ACCAAGCCCG CGGCCCGGTC CGTCAAGCCC GCCTCGGCAC CCCAGGACAC TACGACCAGC ACCATCCCGA AAAGGAAGAC CCGCGCCGCG GCCAAATCCG CCGCCGCGAA GGCACCGTCG GCCCGCGGCC ACGCGACCAA GCCACGGGCG CCCAAGGATG CCCAGCACGA AGCCGCAACG GATCCCGAGG ACGCCCTGGA CTCCGTCGAG GAGCTCGACG CTGAACCAGA CCTCGACGTC GAGCCCGGCG AGGACCTCGA CCTTGACGCC GCCGACCTCA ACCTCGATGA CCTCGAGGAC GACGTGGCGC CGGACGCCGA CGACGACCTC GACTCGGGCG ACGACGAAGA CCACGAAGAC CTCGAAGCTG AGGCGGCCGT CGCGCCCGGC CAGACCGCCG ATGACGACGA GGAGATCGCT GAACCCACCG AAAAGGACAA GGCCTCCGGT GATTTCGTCT GGGATGAAGA CGAGTCGGAG GCCCTGCGTC AAGCACGCAA GGACGCCGAA CTCACCGCAT CCGCCGACTC GGTTCGCGCC TACCTCAAAC AGATCGGCAA GGTAGCGCTG CTCAACGCCG AGGAAGAGGT CGAGCTAGCC AAGCGGATCG AGGCTGGCCT GTACGCCACG CAGCTGATGA CCGAGCTTAG CGAGCGCGGC GAAAAGCTGC CTGCCGCCCA GCGCCGCGAC ATGATGTGGA TCTGCCGCGA CGGCGATCGC GCGAAAAACC ATCTGCTGGA AGCCAACCTG CGCCTGGTGG TTTCGCTAGC CAAGCGCTAC ACCGGCCGGG GCATGGCGTT TCTCGACCTG ATCCAGGAAG GCAACCTGGG GCTGATCCGC GCGGTGGAGA AGTTCGACTA CACCAAGGGG TACAAGTTCT CCACCTACGC TACGTGGTGG ATTCGCCAGG CCATCACCCG CGCCATGGCC GACCAGGCCC GCACCATCCG CATCCCGGTG CACATGGTCG AGGTGATCAA CAAGCTGGGC CGCATTCAAC GCGAGCTGCT GCAGGACCTG GGCCGCGAGC CCACGCCCGA GGAGCTGGCC AAAGAGATGG ACATCACCCC GGAGAAGGTG CTGGAAATCC AGCAATACGC CCGCGAGCCG ATCTCGTTGG ACCAGACCAT CGGCGACGAG GGCGACAGCC AGCTTGGCGA TTTCATCGAA GACAGCGAGG CGGTGGTGGC CGTCGACGCG GTGTCCTTCA CTTTGCTGCA GGATCAACTG CAGTCGGTGC TGGACACGCT CTCCGAGCGT GAGGCGGGCG TGGTGCGGCT ACGCTTCGGC CTTACCGACG GCCAGCCGCG CACCCTTGAC GAGATCGGCC AGGTCTACGG CGTGACCCGG GAACGCATCC GCCAGATCGA ATCCAAGACT ATGTCGAAGT TGCGCCATCC GAGCCGCTCA CAGGTCCTGC GCGACTACCT GGACTGA
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Protein sequence | MAATKASTAT DEPVKRTATK SPAASASGAK TGAKRTAAKS ASGSPPAKRA TKPAARSVKP ASAPQDTTTS TIPKRKTRAA AKSAAAKAPS ARGHATKPRA PKDAQHEAAT DPEDALDSVE ELDAEPDLDV EPGEDLDLDA ADLNLDDLED DVAPDADDDL DSGDDEDHED LEAEAAVAPG QTADDDEEIA EPTEKDKASG DFVWDEDESE ALRQARKDAE LTASADSVRA YLKQIGKVAL LNAEEEVELA KRIEAGLYAT QLMTELSERG EKLPAAQRRD MMWICRDGDR AKNHLLEANL RLVVSLAKRY TGRGMAFLDL IQEGNLGLIR AVEKFDYTKG YKFSTYATWW IRQAITRAMA DQARTIRIPV HMVEVINKLG RIQRELLQDL GREPTPEELA KEMDITPEKV LEIQQYAREP ISLDQTIGDE GDSQLGDFIE DSEAVVAVDA VSFTLLQDQL QSVLDTLSER EAGVVRLRFG LTDGQPRTLD EIGQVYGVTR ERIRQIESKT MSKLRHPSRS QVLRDYLD
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