| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12666 |
|---|
| Symbol | |
|---|
| ID | 5223352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2985754 |
|---|
| End bp | 2987193 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640607432 |
|---|
| Product | phiRv2 prophage protein |
|---|
| Protein accession | YP_001288595 |
|---|
| Protein GI | 148823841 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 169 |
|---|
| Plasmid unclonability p-value | 1.5272e-17 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 222 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATG AACAACATTT CGCTGACGAT GGCGACATCA AACAGCTCAG CCTCGACGAA
ACCCGTTCCG CGGCAAAACA GCTCCTCGAC TCCGTCGAGG GCGACCTGAC CGGTGATGTG
GCGCAACGTT TTCAGGCGCT GACACGCCAC GCCGAGGAAC TGCGGGCGGA GCAGCGCCGC
CGCGGCCGCG AAGCCGAGGA GGCGCTGCGC CGCTGCCGGG CCGGTGAGCT GAGGGTGGTG
CCCGGTGCTC CCACCGGCGG CGACGACGGC GACGCGCCGC CGGGCAACTC GTTGCGCGAC
ACCGCGTTTC GCACACTGGA CGTTTGTGTG CGCGATGGCC TGATGTCGTC GCGGGCGGCG
GAAGCCGCGG AAACCTTGTG CCGCACCGGG CCGCCGCAGT CGACGTCGTG GGCGCAGCGC
TGGCTGGCGG CCACCGGCAA CCGCGACTAC CTGGGGGCGT TCGTCAAGAG GGTTTCGAAC
CCTGTTGCGG GGCACACGAC CTGGACCGAC CGGGAAGCGG CCGCGTGGCG TGAGGCGGCC
GCGGTGGCCG CCGAGCAGCG AGCAATGGGC TTGGTGGACA CCGCCGGCGG GTTTTTGATC
CCGGCGGCGC TGGATCCGGC GATTCTGCTG TCGGGTGATG GTTCAACGAA TCCGATCCGG
CAGGTGGCGA GGGTGGTGCA AACGACCTCC GAGGTTTGGC GGGGCGTGAC CTCCGAAGGC
GCCGAGGCTC ATTGGTACTC CGAAGCCCAG GAGGTGTCCG ACGATTCGCC AACGCTGGCC
CAGCCGGCGG TGCCGAGCTA CCGTGGCTCC TGCTGGATTC CGTTCAGTCT CGAGATTGAG
GGTGACGCCG CCGGATTCGT CGCAGAGGTG GGCCGCGTCC TAGCGGATTC GGTTGAGCAG
CTGCAGGCGG CGGCGTTCGT CAGCGGCTCC GGCAACGGCG AGCCCACCGG ATTCGTCTCC
GCACTGACCG GCACCGCGGA CTACACCGTC ACCGGCGCGG GGACGGAAGC CGTTGTAGCC
GCCGACGTTT ACGCGCTGCA GTCGGCGTTG CCGCCGCGCT TTCAATCCAA CAGCGCGTTC
GCGGCGAACT TGTCCACCAT CAACGTGCTG CGCCAGGCGG AAACCGCGAA TGGGGCGCTG
AAATTCCCAT CGCTGCACGC CAGCCCGCCG ATGCTGGCCG GGAAACACAT CTGGGAGGTG
TCGAACATGG ACACCGTGGA CGCGGCGGTG ACCGCCACCA ATTACCCGCT GGTGCTTGGC
GACTGGAAGC AGTTCATCAT CACCGACCGG GTCGGGTCGA CGGTGGAGCT GGTGCCGCAC
GTGTTCGGCG GCAACCGCCG ACCGACCGGA CAGCGCGGAT TCTTCTGCTG GTTCCGAGTC
GGTTCTGATG TGCTGGTGGA CAATGCGTTC CGCGTGCTGA AGGTGCAGAC CACCGCGTAG
|
|---|
| Protein sequence | MTNEQHFADD GDIKQLSLDE TRSAAKQLLD SVEGDLTGDV AQRFQALTRH AEELRAEQRR
RGREAEEALR RCRAGELRVV PGAPTGGDDG DAPPGNSLRD TAFRTLDVCV RDGLMSSRAA
EAAETLCRTG PPQSTSWAQR WLAATGNRDY LGAFVKRVSN PVAGHTTWTD REAAAWREAA
AVAAEQRAMG LVDTAGGFLI PAALDPAILL SGDGSTNPIR QVARVVQTTS EVWRGVTSEG
AEAHWYSEAQ EVSDDSPTLA QPAVPSYRGS CWIPFSLEIE GDAAGFVAEV GRVLADSVEQ
LQAAAFVSGS GNGEPTGFVS ALTGTADYTV TGAGTEAVVA ADVYALQSAL PPRFQSNSAF
AANLSTINVL RQAETANGAL KFPSLHASPP MLAGKHIWEV SNMDTVDAAV TATNYPLVLG
DWKQFIITDR VGSTVELVPH VFGGNRRPTG QRGFFCWFRV GSDVLVDNAF RVLKVQTTA
|
|---|
| |