| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12603 |
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| Symbol | |
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| ID | 5223284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 2921143 |
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| End bp | 2923515 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640607365 |
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| Product | GTP pyrophosphokinase relA |
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| Protein accession | YP_001288532 |
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| Protein GI | 148823778 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 161 |
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| Plasmid unclonability p-value | 0.00000342988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 198 |
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| Fosmid unclonability p-value | 0.752099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAGG ACCAGCTCAC GGCGCAAGCG GTTGCACCGC CCACGGAGGC TTCTGCGGCT
CTCGAGCCCG CTCTCGAGAC GCCCGAGTCG CCGGTCGAGA CTCTTAAGAC CAGCATCAGC
GCGTCGCGTC GGGTGCGGGC CCGATTGGCC CGGCGGATGA CCGCCCAGCG CAGCACCACC
AATCCGGTGC TCGAGCCGTT GGTGGCGGTG CACCGGGAGA TCTATCCCAA GGCCGACCTG
TCGATCTTGC AGCGAGCCTA CGAGGTCGCT GACCAAAGGC ATGCCAGCCA GTTGCGGCAG
TCCGGTGATC CCTACATCAC CCACCCGTTG GCCGTTGCCA ACATTCTGGC CGAGTTGGGC
ATGGACACCA CCACTTTGGT GGCCGCGCTG CTGCACGACA CCGTCGAGGA CACCGGTTAC
ACCCTGGAGG CGTTGACCGA GGAATTCGGC GAAGAGGTGG GCCATCTCGT CGACGGGGTG
ACCAAGCTGG ATCGGGTGGT GTTGGGCAGC GCCGCCGAAG GCGAGACTAT TCGCAAGATG
ATCACCGCGA TGGCCCGCGA TCCGCGGGTG CTGGTGATAA AGGTGGCTGA CCGGTTACAC
AACATGCGCA CCATGCGCTT CTTGCCGCCG GAGAAGCAGG CCCGCAAGGC CCGTGAGACG
TTGGAAGTCA TTGCACCCCT GGCGCATCGG CTGGGCATGG CCAGCGTCAA GTGGGAGTTG
GAGGACCTGT CCTTCGCGAT CCTGCATCCC AAGAAGTACG AGGAGATCGT CCGGCTGGTC
GCCGGTCGCG CGCCGTCCCG GGACACCTAC CTGGCCAAGG TGCGTGCCGA AATCGTCAAC
ACGCTGACCG CGTCGAAGAT CAAGGCGACG GTGGAGGGCC GCCCCAAGCA CTATTGGTCG
ATCTACCAGA AGATGATCGT TAAGGGCCGC GACTTCGACG ACATCCACGA CCTGGTCGGT
GTGCGCATCC TGTGCGACGA AATCCGGGAC TGCTACGCGG CTGTCGGCGT AGTGCATTCG
CTATGGCAGC CGATGGCGGG TCGGTTCAAG GACTACATCG CCCAGCCCAG ATACGGTGTG
TACCAGTCAC TGCACACCAC TGTGGTCGGG CCTGAGGGCA AGCCGCTGGA AGTGCAGATC
CGTACCCGCG ACATGCACCG CACCGCCGAA TACGGCATCG CCGCGCATTG GCGCTACAAA
GAAGCCAAGG GCCGCAACGG TGTTCTTCAT CCGCATGCCG CCGCGGAGAT CGACGACATG
GCCTGGATGC GTCAGCTGCT CGACTGGCAA CGTGAGGCGG CCGACCCCGG TGAGTTCTTG
GAATCATTGC GCTACGACCT TGCGGTGCAA GAGATTTTCG TGTTTACCCC CAAGGGCGAC
GTGATCACGC TGCCAACCGG TTCGACGCCG GTGGACTTCG CTTACGCGGT GCACACAGAG
GTGGGCCACC GCTGCATCGG CGCCCGAGTG AACGGCCGGT TGGTAGCGCT GGAACGCAAG
CTGGAAAACG GAGAAGTTGT CGAGGTTTTC ACGTCCAAGG CGCCGAACGC CGGGCCGTCG
CGGGACTGGC AGCAGTTCGT GGTGTCGCCG CGCGCAAAGA CGAAGATCCG CCAGTGGTTC
GCCAAGGAGC GGCGTGAGGA GGCGTTGGAG ACCGGTAAGG ATGCGATGGC CCGCGAGGTG
CGCCGCGGTG GACTTCCGTT GCAGCGCTTG GTCAATGGTG AGTCCATGGC GGCGGTGGCC
CGCGAGCTGC ACTACGCGGA CGTGTCAGCA CTCTATACCG CCATCGGTGA GGGGCACGTG
TCGGCGAAAC ACGTCGTGCA GCGGTTGTTG GCCGAGCTCG GCGGTATCGA CCAGGCGGAA
GAGGAACTCG CCGAGCGGTC CACGCCGGCG ACCATGCCGC GGCGCCCACG CAGCACCGAC
GATGTCGGGG TCTCCGTCCC CGGCGCCCCG GGCGTGCTGA CCAAGCTGGC CAAGTGCTGC
ACGCCGGTTC CGGGCGATGT GATTATGGGG TTCGTCACCC GTGGCGGCGG GGTCAGTGTG
CACCGCACCG ACTGCACCAA CGCCGCATCG CTGCAGCAGC AGGCCGAGCG CATCATCGAG
GTGCTATGGG CGCCGTCGCC GTCGTCGGTG TTTCTGGTGG CAATCCAGGT CGAGGCACTC
GACCGGCACC GGCTGCTGTC GGATGTGACG CGCGCACTGG CCGACGAGAA GGTCAATATC
CTGTCCGCGT CGGTCACCAC TTCGGGGGAC CGGGTGGCGA TCAGTCGATT CACCTTCGAG
ATGGGTGACC CCAAGCACCT CGGGCACCTG CTCAACGCCG TCCGCAACGT CGAAGGTGTC
TACGACGTCT ACCGGGTGAC CTCGGCCGCG TAG
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| Protein sequence | MAEDQLTAQA VAPPTEASAA LEPALETPES PVETLKTSIS ASRRVRARLA RRMTAQRSTT
NPVLEPLVAV HREIYPKADL SILQRAYEVA DQRHASQLRQ SGDPYITHPL AVANILAELG
MDTTTLVAAL LHDTVEDTGY TLEALTEEFG EEVGHLVDGV TKLDRVVLGS AAEGETIRKM
ITAMARDPRV LVIKVADRLH NMRTMRFLPP EKQARKARET LEVIAPLAHR LGMASVKWEL
EDLSFAILHP KKYEEIVRLV AGRAPSRDTY LAKVRAEIVN TLTASKIKAT VEGRPKHYWS
IYQKMIVKGR DFDDIHDLVG VRILCDEIRD CYAAVGVVHS LWQPMAGRFK DYIAQPRYGV
YQSLHTTVVG PEGKPLEVQI RTRDMHRTAE YGIAAHWRYK EAKGRNGVLH PHAAAEIDDM
AWMRQLLDWQ REAADPGEFL ESLRYDLAVQ EIFVFTPKGD VITLPTGSTP VDFAYAVHTE
VGHRCIGARV NGRLVALERK LENGEVVEVF TSKAPNAGPS RDWQQFVVSP RAKTKIRQWF
AKERREEALE TGKDAMAREV RRGGLPLQRL VNGESMAAVA RELHYADVSA LYTAIGEGHV
SAKHVVQRLL AELGGIDQAE EELAERSTPA TMPRRPRSTD DVGVSVPGAP GVLTKLAKCC
TPVPGDVIMG FVTRGGGVSV HRTDCTNAAS LQQQAERIIE VLWAPSPSSV FLVAIQVEAL
DRHRLLSDVT RALADEKVNI LSASVTTSGD RVAISRFTFE MGDPKHLGHL LNAVRNVEGV
YDVYRVTSAA
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