| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12576 |
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| Symbol | alaS |
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| ID | 5223258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 2887089 |
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| End bp | 2889803 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640607338 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001288505 |
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| Protein GI | 148823751 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 183 |
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| Plasmid unclonability p-value | 0.251019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 179 |
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| Fosmid unclonability p-value | 0.0860525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGACAC ACGAGATCAG GAAGCGGTTC CTCGATCATT TCGTGAAGGC GGGCCACACC
GAGGTGCCCA GCGCCTCGGT GATCCTCGAC GACCCCAACC TGTTGTTCGT CAACGCCGGG
ATGGTCCAGT TCGTGCCTTT CTTCTTGGGA CAGCGCACGC CGCCGTACCC GACGGCCACC
AGCATCCAGA AGTGCATCCG TACCCCCGAT ATCGACGAGG TGGGCATAAC CACCCGGCAC
AACACGTTTT TTCAGATGGC CGGCAATTTC AGCTTCGGCG ACTATTTCAA ACGCGGGGCC
ATTGAACTGG CCTGGGCACT GCTGACCAAC AGCCTCGCCG CCGGCGGCTA CGGCCTGGAC
CCGGAAAGAA TCTGGACGAC AGTCTATTTC GACGACGACG AAGCTGTCCG GCTATGGCAG
GAGGTTGCCG GGCTGCCGGC GGAGCGAATC CAGCGCCGCG GCATGGCCGA CAACTACTGG
TCGATGGGCA TTCCCGGACC GTGCGGGCCG TCATCGGAGA TCTATTACGA CCGCGGACCC
GAATTCGGTC CCGCAGGCGG TCCCATCGTC AGCGAAGACC GCTACCTCGA GGTCTGGAAC
CTGGTGTTCA TGCAGAACGA GCGCGGAGAG GGAACCACCA AGGAGGACTA CCAGATCCTC
GGGCCGCTGC CCCGCAAGAA CATCGACACC GGCATGGGCG TCGAGCGGAT CGCGCTGGTG
CTGCAAGACG TGCACAACGT CTACGAGACC GACCTGCTCA GGCCGGTCAT CGATACCGTG
GCCAGGGTCG CCGCGCGTGC CTACGACGTC GGCAACCACG AAGACGACGT GCGGTACCGC
ATCATCGCAG ACCACAGCCG CACCGCCGCG ATCCTGATCG GTGACGGCGT CAGCCCCGGC
AACGACGGTC GCGGTTATGT GCTGCGCCGG CTGCTGCGTC GGGTGATCCG CTCCGCCAAG
CTGCTGGGCA TCGACGCTGC GATCGTTGGC GACCTGATGG CCACGGTGCG CAACGCGATG
GGCCCGTCAT ATCCCGAACT CGTCGCCGAC TTCGAGCGGA TCAGCCGGAT CGCGGTCGCC
GAGGAGACGG CGTTCAACCG CACGCTGGCG TCGGGTTCCA GGCTGTTCGA GGAGGTGGCT
AGCTCCACCA AGAAATCCGG AGCCACCGTG CTGTCCGGAT CGGACGCTTT CACGTTGCAT
GACACCTACG GGTTCCCGAT CGAGCTCACG CTGGAGATGG CGGCCGAAAC CGGTCTGCAG
GTAGACGAAA TCGGGTTCCG TGAGCTGATG GCCGAGCAGC GCCGCCGTGC CAAGGCCGAC
GCCGCCGCGC GCAAACACGC GCATGCTGAC CTGAGCGCCT ACCGCGAGCT GGTTGACGCC
GGCGCCACCG AGTTCACCGG ATTCGACGAG TTGCGTTCCC AGGCGCGGAT TCTGGGCATC
TTCGTCGACG GTAAGCGGGT TCCGGTGGTG GCGCACGGTG TAGCCGGCGG AGCCGGGGAA
GGGCAGCGTG TCGAACTTGT CTTAGATCGC ACCCCGCTCT ACGCCGAATC GGGTGGGCAG
ATCGCCGATG AGGGCACCAT CAGCGGAACC GGTTCCAGCG AAGCTGCCCG GGCCGCGGTT
ACCGACGTGC AGAAGATCGC CAAAACGCTT TGGGTGCACC GAGTCAACGT GGAATCCGGG
GAATTCGTCG AGGGTGACAC CGTAATCGCG GCGGTGGATC CCGGGTGGCG CCGGGGTGCC
ACGCAGGGCC ACTCGGGCAC CCACATGGTG CATGCCGCGC TGCGACAAGT GCTGGGGCCC
AACGCGGTTC AGGCGGGATC GCTGAACCGG CCGGGATATT TGCGCTTCGA CTTTAACTGG
CAGGGTCCGT TGACCGACGA CCAGCGCACC CAGGTCGAAG AGGTCACCAA CGAGGCCGTG
CAAGCGGACT TCGAGGTGCG CACGTTCACC GAACAGCTCG ACAAGGCCAA GGCGATGGGT
GCCATCGCGC TGTTCGGCGA GAGCTACCCC GACGAAGTGC GGGTGGTGGA GATGGGTGGA
CCGTTCTCGC TGGAGCTATG TGGCGGCACC CATGTGAGCA ACACGGCGCA GATCGGTCCC
GTGACGATCC TGGGCGAGTC GTCGATCGGC TCCGGGGTGC GCCGGGTGGA GGCCTACGTG
GGGTTGGATT CGTTTCGTCA CCTGGCCAAG GAGCGTGCGT TGATGGCCGG GTTGGCCTCG
TCACTGAAGG TGCCGTCCGA AGAGGTACCG GCCCGGGTGG CCAATCTAGT GGAGCGCCTG
CGGGCCGCCG AGAAGGAACT CGAACGTGTC CGGATGGCCA GCGCCCGGGC AGCCGCCACC
AATGCCGCCG CCGGGGCTCA GCGGATCGGT AACGTCCGTT TGGTGGCGCA GCGAATGTCC
GGCGGGATGA CCGCGGCAGA CCTGCGGTCG TTGATCGGCG ACATCCGCGG CAAGCTGGGT
AGCGAGCCGG CGGTGGTGGC GCTGATTGCC GAGGGCGAAA GCCAAACTGT GCCGTATGCG
GTCGCGGCCA ATCCCGCTGC CCAGGACCTC GGAATCCGTG CCAACGACCT GGTCAAACAA
CTTGCGGTGG CGGTCGAAGG CCGCGGTGGC GGTAAGGCGG ACCTGGCGCA GGGCTCGGGA
AAGAATCCGA CCGGTATCGA CGCCGCGCTC GACGCGGTCC GCTCCGAGAT CGCCGTGATA
GCGCGGGTCG GTTGA
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| Protein sequence | MQTHEIRKRF LDHFVKAGHT EVPSASVILD DPNLLFVNAG MVQFVPFFLG QRTPPYPTAT
SIQKCIRTPD IDEVGITTRH NTFFQMAGNF SFGDYFKRGA IELAWALLTN SLAAGGYGLD
PERIWTTVYF DDDEAVRLWQ EVAGLPAERI QRRGMADNYW SMGIPGPCGP SSEIYYDRGP
EFGPAGGPIV SEDRYLEVWN LVFMQNERGE GTTKEDYQIL GPLPRKNIDT GMGVERIALV
LQDVHNVYET DLLRPVIDTV ARVAARAYDV GNHEDDVRYR IIADHSRTAA ILIGDGVSPG
NDGRGYVLRR LLRRVIRSAK LLGIDAAIVG DLMATVRNAM GPSYPELVAD FERISRIAVA
EETAFNRTLA SGSRLFEEVA SSTKKSGATV LSGSDAFTLH DTYGFPIELT LEMAAETGLQ
VDEIGFRELM AEQRRRAKAD AAARKHAHAD LSAYRELVDA GATEFTGFDE LRSQARILGI
FVDGKRVPVV AHGVAGGAGE GQRVELVLDR TPLYAESGGQ IADEGTISGT GSSEAARAAV
TDVQKIAKTL WVHRVNVESG EFVEGDTVIA AVDPGWRRGA TQGHSGTHMV HAALRQVLGP
NAVQAGSLNR PGYLRFDFNW QGPLTDDQRT QVEEVTNEAV QADFEVRTFT EQLDKAKAMG
AIALFGESYP DEVRVVEMGG PFSLELCGGT HVSNTAQIGP VTILGESSIG SGVRRVEAYV
GLDSFRHLAK ERALMAGLAS SLKVPSEEVP ARVANLVERL RAAEKELERV RMASARAAAT
NAAAGAQRIG NVRLVAQRMS GGMTAADLRS LIGDIRGKLG SEPAVVALIA EGESQTVPYA
VAANPAAQDL GIRANDLVKQ LAVAVEGRGG GKADLAQGSG KNPTGIDAAL DAVRSEIAVI
ARVG
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