| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12530 |
|---|
| Symbol | |
|---|
| ID | 5223210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2836574 |
|---|
| End bp | 2837911 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640607290 |
|---|
| Product | leucine and alanine rich integral membrane protein |
|---|
| Protein accession | YP_001288459 |
|---|
| Protein GI | 148823705 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2270] Permeases of the major facilitator superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 399 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 173 |
|---|
| Fosmid unclonability p-value | 0.0104482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACC CGGGGTCGCG CGCGGGCACC CTCCTGCACT TCCGGGTGGT GGCGTGGGCC
ATGTGGGATT GCGGTTCCAC CGGTCTGAAC GCGATCGTGA CAACCTTTGT GTTCTCCGTC
TACCTGACCA GCGCCGTGGG TCAGGGTCTG CCGGGCGGCA CCTCACCGGC GAGTTGGTTG
GGTCGTGCGG GGGCGGTCGC CGGGTTGACC ATCGGGGTGC TGGCGCCCGT CGTCGGCGTG
TGGGTGGAGT CTCCGCACCG CCGTCGGGTG GCACTGTCTG TGCTGACCGG CACCGCGGTC
GCGCTGACCT GCGCAATGTT CCTGATCCGC GACGACCCCC GCTACCTGTG GGCCGGGCTG
GTTTTGCTCG CGGCCACCGC GGCGTCCAGC GATTTGTCCA GCGTTCCGTA CAACGCGATG
CTGCGCCAAC TGTCCACACC CAGCACGGCG GGCCGGATCT CCGGCTTCGG TTGGGCGTCG
GGCTATGTCG GCAGCGTCGC GCTCTTGCTG GTGATCTATC TGGGTTTCAT GTCAGGTAGC
GGTTCGCAGC GCGGCCTGCT GCAGCTACCC GTCGCGAACG GACTCAACGT GCGAATGGCG
ATGCTGGTTG CGGCGGCCTG GTTGGCGTTG CTGGGCCTGC CATTGTTGTT GGTCGCGCAC
CGACTACCCG ATTCCGGTGC GGCGTCTCAT CCTTCGACCG GCCTGCTGGG CGGCTACCGC
AAGCTGTGGA CGGAGATCAG CGCGGAGTGG CGGCGCGACC GCAACTTGGT CTACTTCCTG
GTGGCCAGCG CGATATTCCG CGACGGGCTG GCGGCCATTT TCGCCTTCGG CGCGGTACTT
GGCGTCAACG CATACGGGCT CACCCAGGCC GATGTCCTGA TCTTTGGTGC GGCCGCAAGC
GTGGTGGCTG CGGTGGGGGC CGTGCTGGGT GGGTTCGTCG ACCACCGGAT CGGGTCCAAA
CCGGTCATCG TCGGATCACT GGCCGCCATC ATCGCCGCGG CGCTCACGTT GCTGACGTTG
TCGGGCCCAA CGGCGTTCTG GGCGTGCGGG CTGCTGTTGT GTGTGTTCAT CGGGCCGGCG
CAGTCGTCGG CACGCGCTCT GCTGCTGCAT ATGGCGCAGC ACGGCAAGGA GGGTGTGGCC
TTTGGGCTCT ACACGATGAC CGGCCGGGCG GTGTCGTTTC TGGGGCCGTG GTTGTTTTCG
GTCTTCGTCG ACGTGTTCCA CACGGTCCGT GCCGGGCTCG GCGGCGTGTG CCTCGTGTTG
ACAACCGGCC TGCTGCTCAT GCTGCGGGTA CAGGTGTCGC GGCACGGCGG TGCGCTGACG
ACGGCGCAAT CCTCCTAG
|
|---|
| Protein sequence | MNNPGSRAGT LLHFRVVAWA MWDCGSTGLN AIVTTFVFSV YLTSAVGQGL PGGTSPASWL
GRAGAVAGLT IGVLAPVVGV WVESPHRRRV ALSVLTGTAV ALTCAMFLIR DDPRYLWAGL
VLLAATAASS DLSSVPYNAM LRQLSTPSTA GRISGFGWAS GYVGSVALLL VIYLGFMSGS
GSQRGLLQLP VANGLNVRMA MLVAAAWLAL LGLPLLLVAH RLPDSGAASH PSTGLLGGYR
KLWTEISAEW RRDRNLVYFL VASAIFRDGL AAIFAFGAVL GVNAYGLTQA DVLIFGAAAS
VVAAVGAVLG GFVDHRIGSK PVIVGSLAAI IAAALTLLTL SGPTAFWACG LLLCVFIGPA
QSSARALLLH MAQHGKEGVA FGLYTMTGRA VSFLGPWLFS VFVDVFHTVR AGLGGVCLVL
TTGLLLMLRV QVSRHGGALT TAQSS
|
|---|
| |