Gene TBFG_12482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12482 
SymbolclpX 
ID5223159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2772882 
End bp2774162 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content62% 
IMG OID640607239 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_001288411 
Protein GI148823657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones394 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones215 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA TAGGAGACGG TGGTGACCTG CTGAAGTGCT CGTTCTGCGG GAAGAGCCAA 
AAACAGGTCA AGAAGCTCAT TGCCGGCCCC GGCGTGTACA TCTGCGATGA GTGCATCGAC
CTGTGTAACG AGATCATCGA AGAGGAACTC GCCGACGCCG ACGATGTGAA ACTCGACGAG
CTGCCCAAGC CGGCCGAGAT CCGGGAGTTC CTCGAGGGCT ACGTCATCGG GCAAGATACC
GCCAAACGCA CGCTGGCCGT GGCGGTGTAC AACCACTACA AGCGGATCCA GGCCGGGGAG
AAGGGCCGTG ACTCCCGATG TGAGCCCGTT GAGTTGACCA AGTCGAACAT CTTGATGCTC
GGACCCACCG GTTGTGGCAA GACCTACCTG GCCCAGACGC TGGCCAAGAT GCTTAACGTG
CCGTTTGCCA TCGCCGACGC CACCGCGCTG ACCGAGGCCG GTTACGTCGG CGAGGACGTC
GAGAACATCT TGCTCAAACT TATTCAGGCC GCCGACTACG ACGTCAAACG CGCCGAGACC
GGCATCATCT ACATCGACGA GGTCGACAAG ATCGCCCGCA AGAGTGAGAA CCCGTCGATT
ACTCGCGACG TCTCCGGTGA GGGCGTTCAG CAGGCCTTGC TGAAAATCCT GGAGGGCACT
CAGGCGTCGG TTCCGCCGCA GGGGGGCCGT AAGCACCCGC ATCAAGAGTT CATCCAGATC
GACACCACCA ACGTGCTGTT CATCGTCGCG GGAGCGTTCG CCGGGCTGGA GAAGATCATT
TACGAGCGCG TCGGCAAGCG GGGCCTCGGC TTTGGCGCCG AGGTTCGTTC CAAGGCCGAG
ATCGACACCA CCGACCACTT TGCCGACGTG ATGCCGGAGG ATCTGATCAA GTTCGGCCTG
ATCCCGGAAT TCATCGGCCG CCTGCCGGTG GTCGCCTCGG TCACCAACCT GGACAAAGAG
TCGTTGGTCA AGATCCTGTC CGAGCCGAAG AACGCTTTGG TCAAGCAGTA CATCCGGCTG
TTCGAGATGG ATGGCGTGGA GTTGGAGTTC ACCGACGATG CGCTGGAAGC GATCGCCGAC
CAGGCGATCC ATCGCGGCAC CGGTGCCCGC GGCCTGCGGG CGATCATGGA AGAAGTCCTG
CTGCCGGTGA TGTACGACAT CCCGAGCCGC GACGATGTCG CCAAAGTGGT GGTCACCAAG
GAGACCGTGC AGGACAACGT GTTGCCGACA ATCGTGCCAC GCAAGCCGTC CCGTTCGGAG
CGCCGCGACA AGAGCGCGTA G
 
Protein sequence
MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL ADADDVKLDE 
LPKPAEIREF LEGYVIGQDT AKRTLAVAVY NHYKRIQAGE KGRDSRCEPV ELTKSNILML
GPTGCGKTYL AQTLAKMLNV PFAIADATAL TEAGYVGEDV ENILLKLIQA ADYDVKRAET
GIIYIDEVDK IARKSENPSI TRDVSGEGVQ QALLKILEGT QASVPPQGGR KHPHQEFIQI
DTTNVLFIVA GAFAGLEKII YERVGKRGLG FGAEVRSKAE IDTTDHFADV MPEDLIKFGL
IPEFIGRLPV VASVTNLDKE SLVKILSEPK NALVKQYIRL FEMDGVELEF TDDALEAIAD
QAIHRGTGAR GLRAIMEEVL LPVMYDIPSR DDVAKVVVTK ETVQDNVLPT IVPRKPSRSE
RRDKSA