Gene TBFG_12458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12458 
Symbol 
ID5223135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2742010 
End bp2742594 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content60% 
IMG OID640607215 
ProductPPE family protein 
Protein accessionYP_001288387 
Protein GI148823633 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones496 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones208 
Fosmid unclonability p-value0.755851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCG AAGCGTACCC ACCGGAGGTC AACTCCGCCA ACATATATGC CGGCCCCGGT 
CCTGACTCGA TGTTGGCTGC CGCCAGGGCG TGGAGGTCGT TGGATGTGGA AATGACGGCC
GTGCAGAGGT CGTTCAACCG AACGCTGCTG TCTCTGATGG ACGCCTGGGC GGGTCCAGTG
GTGATGCAGT TGATGGAGGC AGCCAAGCCG TTTGTCAGGT GGCTGACCGA CCTCTGTGTG
CAGCTGTCTG AGGTCGAGAG GCAGATCCAC GAGATCGTGC GGGCCTATGA ATGGGCACAT
CACGATATGG TGCCCCTGGC GCAGATCTAC AACAACCGTG CTGAGAGGCA GATTCTGATC
GACAACAACG CGCTTGGGCA ATTCACTGCG CAGATCGCCG ACCTCGACCA AGAATATGAC
GACTTCTGGG ACGAGGACGG AGAGGTGATG AGGGACTACA GGCTTCGGGT GTCGGATGCG
TTGTCGAAGT TGACTCCGTG GAAGGCGCCG CCGCCGATCG CCCACAGTAC CGTGTTGGTC
GCACCGGTGT CACCCAGCAC GGCGTCATCG CGTACAGACA CTTAG
 
Protein sequence
MHFEAYPPEV NSANIYAGPG PDSMLAAARA WRSLDVEMTA VQRSFNRTLL SLMDAWAGPV 
VMQLMEAAKP FVRWLTDLCV QLSEVERQIH EIVRAYEWAH HDMVPLAQIY NNRAERQILI
DNNALGQFTA QIADLDQEYD DFWDEDGEVM RDYRLRVSDA LSKLTPWKAP PPIAHSTVLV
APVSPSTASS RTDT