Gene TBFG_12393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12393 
Symbol 
ID5223071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2661659 
End bp2662207 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID640607151 
Productputative metalloprotease 
Protein accessionYP_001288324 
Protein GI148823570 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones464 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones217 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAGC ATCTTATGAG CATCGAGGTA GCCAACGAGT CAGGCATCGA CGTCTCGGAA 
GCGGAACTAG TCAGTGTCGC ACGGTTTGTC ATCGCCAAGA TGGACGTCAA TCCGTGCGCC
GAATTGTCGA TGCTGCTGCT GGACACCGCG GCGATGGCCG ACCTACACAT GCGCTGGATG
GATCTTCCCG GGCCGACCGA CGTGATGAGC TTCCCGATGG ACGAGCTCGA GCCGGGTGGT
CGCCCCGACG CCCCCGAACC GGGACCGTCC ATGCTGGGCG ATATCGTGCT GTGCCCGGAA
TTCGCCGCTG AGCAGGCGGC TGCGGCCGGC CACAGCCTGG GCCACGAATT GGCCCTGCTG
ACCATCCACG GTGTGCTTCA CCTGCTCGGC TATGACCACG CCGAGCCAGA CGAGGAAAAA
GAGATGTTCG CCCTGCAGGA CCGGTTGCTT GAAGAGTGGG TAGCCGACCA GGTTGAGGCC
TACCAGCACG ACCGGCAGGA CGAGAAGGAC CGCCGGTTGC TCGACAAGTC AAGGTATTTT
GACCTTTGA
 
Protein sequence
MREHLMSIEV ANESGIDVSE AELVSVARFV IAKMDVNPCA ELSMLLLDTA AMADLHMRWM 
DLPGPTDVMS FPMDELEPGG RPDAPEPGPS MLGDIVLCPE FAAEQAAAAG HSLGHELALL
TIHGVLHLLG YDHAEPDEEK EMFALQDRLL EEWVADQVEA YQHDRQDEKD RRLLDKSRYF
DL