Gene TBFG_12253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12253 
Symbol 
ID5222929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2507607 
End bp2509169 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content66% 
IMG OID640607009 
Productexported protease 
Protein accessionYP_001288186 
Protein GI148823432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones288 
Plasmid unclonability p-value0.499354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones210 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCATGA GGCTGTCTCG CCGCGACAAG ATCGCGCGCA TGCTGTTGAT CTGGGCCGCG 
CTCGCCGCCG TGGCGTTGGT TCTTGTGGGC TGCATCCGCG TGGTCGGGGG ACGCGCTCGT
ATGGCGGAGC CGAAGCTGGG CCAGCCGGTG GAGTGGACAC CGTGCCGGTC GTCAAACCCG
CAAGTAAAGA TCCCCGGCGG CGCGTTATGC GGCAAGCTCG CTGTACCGGT CGACTACGAC
CGCCCCGATG GTGACGTGGC GGCGCTGGCG CTGATTCGCT TTCCGGCGAC GGGAGACAAG
ATCGGTTCGC TGGTCATAAA TCCCGGTGGA CCCGGCGAAT CCGGTATCGA GGCCGCCTTG
GGCGTCTTCC AGACATTGCC GAAGCGGGTG CACGAAAGGT TCGACCTGGT TGGGTTCGAC
CCCCGCGGGG TGGCGTCGTC CCGGCCGGCG ATCTGGTGCA ACTCCGATGC CGACAACGAC
CGGCTGCGGG CCGAGCCGCA GGTTGACTAC AGCCGGGAGG GTGTGGCGCA CATCGAGAAC
GAGACCAAGC AATTCGTCGG TCGCTGTGTG GACAAGATGG GCAAGAACTT TCTGGCCCAT
GTCGGGACGG TCAACGTCGC CAAGGACCTG GATGCCATTC GCGCGGCGTT GGGCGACGAC
AAGCTGACCT ACCTGGGCTA CTCGTACGGC ACCCGGATCG GCTCCGCGTA TGCCGAGGAA
TTTCCGCAGC GGGTGCGGGC AATGATTCTC GACGGTGCCG TCGACCCCAA TGCCGATCCC
ATCGAGGCGG AGCTGCGCCA GGCCAAGGGC TTCCAGGACG CGTTCAACAA CTATGCCGCC
GACTGCGCCA AGAACGCGGG CTGCCCGCTG GGCGCCGACC CGGCCAAAGC CGTCGAGGTC
TACCACAGCC TGGTCGATCC GTTGGTCGAC CCGGACAACC CGAGGATCAG CAGGCCGGCG
CGCACGAAGG ATCCGCGCGG GCTGAGTTAT AGCGACGCCA TCGTGGGCAC CATTATGGCG
CTGTACTCAC CGAATCTGTG GCAACACTTG ACCGACGGGC TGTCGGAGCT GGTCGACAAT
CGCGGAGACA CCCTGCTGGC TCTGGCCGAC ATGTACATGC GTCGGGACTC GCACGGCCGC
TACAACAATT CCGGTGACGC GCGGGTGGCG ATCAATTGCG TCGATCAGCC CCCGGTTACC
GATCGCGACA AGGTCATCGA CGAAGACCGC CGCGCCCGGG AGATCGCACC GTTCATGAGC
TACGGGAAGT TCACCGGTGA TGCGCCGCTG GGCACCTGCG CGTTCTGGCC GGTGCCACCC
ACAAGTCAGC CCCATGCCGT CTCGGCGCCC GGCCTAGTGC CGACGGTGGT GGTATCCACC
ACCCATGACC CGGCGACGCC GTACAAGGCC GGGGTCGACC TGGCGAACCA GCTTCGCGGT
TCGTTGCTGA CCTTCGACGG AACCCAGCAC ACGGTGGTAT TCCAGGGCGA CAGCTGCATT
GACGAGTACG TGACGGCGTA TTTAATCGGC GGCACCACGC CGCCCAGCGG CGCCAAGTGC
TAG
 
Protein sequence
MGMRLSRRDK IARMLLIWAA LAAVALVLVG CIRVVGGRAR MAEPKLGQPV EWTPCRSSNP 
QVKIPGGALC GKLAVPVDYD RPDGDVAALA LIRFPATGDK IGSLVINPGG PGESGIEAAL
GVFQTLPKRV HERFDLVGFD PRGVASSRPA IWCNSDADND RLRAEPQVDY SREGVAHIEN
ETKQFVGRCV DKMGKNFLAH VGTVNVAKDL DAIRAALGDD KLTYLGYSYG TRIGSAYAEE
FPQRVRAMIL DGAVDPNADP IEAELRQAKG FQDAFNNYAA DCAKNAGCPL GADPAKAVEV
YHSLVDPLVD PDNPRISRPA RTKDPRGLSY SDAIVGTIMA LYSPNLWQHL TDGLSELVDN
RGDTLLALAD MYMRRDSHGR YNNSGDARVA INCVDQPPVT DRDKVIDEDR RAREIAPFMS
YGKFTGDAPL GTCAFWPVPP TSQPHAVSAP GLVPTVVVST THDPATPYKA GVDLANQLRG
SLLTFDGTQH TVVFQGDSCI DEYVTAYLIG GTTPPSGAKC