| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12156 |
|---|
| Symbol | |
|---|
| ID | 5222831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2396050 |
|---|
| End bp | 2399628 |
|---|
| Gene Length | 3579 bp |
|---|
| Protein Length | 1192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640606911 |
|---|
| Product | 5-methyltetrahydrofolate-homocystein methyltransferase metH |
|---|
| Protein accession | YP_001288089 |
|---|
| Protein GI | 148823335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 145 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 190 |
|---|
| Fosmid unclonability p-value | 0.726643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCGG CCGACAAGCA CCTCTACGAC ACCGATCTGC TCGACGTCTT GTCGCAGCGA
GTGATGGTCG GCGACGGTGC AATGGGAACC CAACTACAGG CCGCGGACCT CACGCTCGAC
GACTTCCGCG GCCTGGAGGG CTGCAACGAG ATCCTCAACG AAACCCGCCC TGACGTGCTG
GAAACCATTC ACCGCAACTA TTTCGAAGCG GGCGCCGACG CCGTCGAGAC GAACACGTTT
GGCTGCAACC TGTCCAACCT CGGCGACTAC GACATCGCCG ACAGGATCCG CGATCTATCA
CAGAAGGGCA CCGCGATCGC ACGCCGGGTG GCCGACGAGC TGGGCAGTCC CGACCGCAAG
CGCTACGTGC TGGGGTCGAT GGGGCCGGGC ACCAAGCTGC CGACTCTGGG CCACACCGAA
TACGCGGTGA TCCGCGACGC CTACACCGAG GCCGCGCTGG GCATGCTGGA CGGCGGAGCC
GACGCCATCC TGGTGGAAAC CTGCCAGGAC CTACTGCAGC TGAAGGCGGC GGTGTTGGGG
TCGCGGCGGG CGATGACGCG GGCCGGGCGG CACATTCCGG TGTTTGCCCA CGTCACCGTC
GAGACCACCG GCACCATGCT GCTGGGCAGC GAGATCGGGG CGGCGTTGAC CGCTGTCGAG
CCGCTCGGTG TGGACATGAT CGGCTTGAAC TGCGCGACGG GTCCGGCCGA GATGAGCGAG
CACCTGCGCC ACCTGTCCCG GCACGCCCGC ATCCCGGTGT CGGTGATGCC CAACGCCGGG
TTGCCGGTGC TGGGCGCCAA GGGCGCCGAA TATCCGTTGC TGCCCGACGA ATTGGCCGAG
GCGCTGGCCG GCTTCATCGC CGAGTTCGGG CTCTCGCTGG TCGGTGGCTG CTGCGGCACC
ACCCCGGCCC ATATCCGCGA AGTGGCTGCC GCGGTTGCGA ACATCAAGCG TCCCGAGCGA
CAGGTCAGCT ACGAGCCGTC GGTGTCGTCG CTGTACACCG CAATCCCGTT CGCCCAGGAC
GCCTCGGTTC TGGTGATCGG GGAGCGAACG AACGCCAACG GCTCCAAGGG TTTTCGTGAG
GCGATGATCG CCGAGGACTA CCAGAAGTGC CTGGACATCG CCAAGGACCA GACCCGCGAC
GGCGCCCACC TGCTGGACCT GTGTGTGGAC TACGTGGGCC GCGACGGTGT GGCCGACATG
AAGGCGCTGG CCAGCCGGCT GGCCACGTCC TCGACGCTGC CGATCATGCT GGACTCCACC
GAAACCGCGG TGCTGCAGGC GGGTTTGGAG CATCTGGGTG GCCGTTGCGC GATCAACTCG
GTGAACTACG AGGACGGCGA CGGCCCGGAA TCGCGCTTTG CCAAGACCAT GGCGCTGGTC
GCCGAGCACG GCGCGGCGGT GGTCGCGCTG ACCATCGACG AAGAGGGCCA GGCCCGCACC
GCGCAGAAGA AGGTCGAGAT CGCCGAGCGG CTGATCAACG ACATCACCGG CAACTGGGGC
GTCGACGAAT CATCCATCCT CATCGACACC TTGACGTTCA CCATCGCCAC CGGTCAGGAG
GAGTCCCGCC GCGACGGCAT CGAGACCATC GAGGCGATCC GCGAACTGAA AAAGCGCCAC
CCGGATGTGC AGACCACACT TGGTCTGTCC AACATCTCGT TTGGTCTCAA TCCCGCAGCG
CGCCAGGTGC TCAACTCGGT GTTCCTGCAC GAATGCCAAG AAGCGGGGCT GGATTCGGCG
ATCGTGCACG CGTCGAAGAT CCTGCCGATG AACCGGATTC CCGAGGAGCA ACGCAACGTC
GCCCTGGATC TGGTCTACGA CCGCCGCCGC GAGGACTACG ATCCGCTGCA GGAGCTGATG
CGGCTGTTCG AAGGCGTGTC GGCGGCCTCC TCGAAAGAGG ACCGACTGGC TGAACTAGCT
GGGCTGCCGC TGTTCGAACG GCTGGCCCAA CGCATCGTCG ACGGCGAGCG CAACGGCCTG
GACGCCGATC TCGACGAGGC GATGACGCAA AAGCCGCCGC TTCAGATCAT CAACGAACAT
CTGCTGGCCG GCATGAAGAC GGTCGGCGAG CTCTTCGGCT CCGGCCAGAT GCAGCTGCCG
TTCGTGCTGC AGTCGGCGGA GGTAATGAAA GCCGCCGTCG CGTATCTGGA ACCGCACATG
GAGCGCTCGG ACGACGATTC GGGCAAGGGA CGCATCGTGC TGGCCACCGT CAAGGGCGAC
GTGCACGACA TCGGCAAGAA CCTGGTCGAC ATCATCTTGA GCAACAACGG CTACGAAGTG
GTCAACATCG GCATCAAGCA GCCAATCGCC ACCATCCTCG AAGTCGCCGA GGACAAGAGC
GCCGACGTGG TCGGCATGTC GGGCCTGCTG GTGAAGTCGA CCGTGGTGAT GAAGGAAAAC
CTCGAGGAGA TGAACACCCG GGGAGTCGCC GAAAAGTTCC CGGTGCTGCT CGGCGGCGCG
GCGTTGACGC GCAGCTATGT CGAAAACGAC CTGGCCGAGA TCTACCAGGG CGAAGTGCAT
TACGCGCGAG ACGCTTTCGA GGGCCTGAAG TTGATGGACA CCATCATGAG CGCCAAGCGC
GGCGAGGCGC CCGACGAAAA CAGCCCGGAA GCCATTAAGG CGCGTGAGAA AGAAGCCGAA
CGTAAGGCCC GCCACCAGCG ATCCAAACGC ATTGCCGCAC AGCGCAAAGC CGCCGAAGAA
CCAGTCGAGG TGCCCGAACG CTCCGATGTC GCGGCCGACA TCGAGGTCCC GGCGCCGCCG
TTCTGGGGTT CGCGGATCGT CAAGGGCCTG GCGGTGGCCG ACTACACCGG TCTGCTCGAT
GAGCGCGCAT TGTTTTTGGG CCAGTGGGGT TTACGCGGCC AGCGCGGCGG TGAGGGTCCG
TCCTACGAAG ATCTCGTCGA GACCGAGGGC CGGCCGCGGC TGCGGTACTG GTTGGACCGG
CTGTCCACCG ACGGCATCTT GGCGCACGCC GCCGTGGTGT ACGGCTATTT CCCGGCGGTG
TCCGAGGGCA ACGACATCGT GGTGCTCACC GAGCCCAAGC CCGACGCCCC GGTGCGCTAC
CGGTTTCACT TCCCGCGCCA GCAGCGCGGT CGGTTTTTGT GCATTGCCGA TTTCATCCGC
TCGCGGGAGC TGGCCGCCGA GCGTGGCGAG GTTGACGTGC TGCCGTTCCA GCTGGTGACC
ATGGGTCAGC CGATCGCGGA TTTCGCCAAC GAGCTGTTCG CGTCCAACGC CTACCGCGAC
TACCTGGAGG TGCACGGTAT CGGCGTGCAG CTCACCGAGG CGCTGGCCGA GTACTGGCAC
CGGCGGATCC GTGAGGAGCT CAAGTTCTCC GGGGATCGGG CGATGGCGGC CGAGGATCCG
GAGGCGAAAG AAGACTATTT CAAGCTCGGC TACCGCGGTG CTCGCTTTGC CTTCGGCTAC
GGCGCATGCC CGGATCTGGA GGACCGCGCC AAGATGATGG CGCTGCTGGA GCCCGAACGC
ATCGGTGTGA CGTTATCCGA GGAATTACAG CTGCATCCCG AACAGTCGAC CGACGCGTTC
GTCCTGCACC ATCCGGAAGC CAAGTACTTC AACGTTTAA
|
|---|
| Protein sequence | MTAADKHLYD TDLLDVLSQR VMVGDGAMGT QLQAADLTLD DFRGLEGCNE ILNETRPDVL
ETIHRNYFEA GADAVETNTF GCNLSNLGDY DIADRIRDLS QKGTAIARRV ADELGSPDRK
RYVLGSMGPG TKLPTLGHTE YAVIRDAYTE AALGMLDGGA DAILVETCQD LLQLKAAVLG
SRRAMTRAGR HIPVFAHVTV ETTGTMLLGS EIGAALTAVE PLGVDMIGLN CATGPAEMSE
HLRHLSRHAR IPVSVMPNAG LPVLGAKGAE YPLLPDELAE ALAGFIAEFG LSLVGGCCGT
TPAHIREVAA AVANIKRPER QVSYEPSVSS LYTAIPFAQD ASVLVIGERT NANGSKGFRE
AMIAEDYQKC LDIAKDQTRD GAHLLDLCVD YVGRDGVADM KALASRLATS STLPIMLDST
ETAVLQAGLE HLGGRCAINS VNYEDGDGPE SRFAKTMALV AEHGAAVVAL TIDEEGQART
AQKKVEIAER LINDITGNWG VDESSILIDT LTFTIATGQE ESRRDGIETI EAIRELKKRH
PDVQTTLGLS NISFGLNPAA RQVLNSVFLH ECQEAGLDSA IVHASKILPM NRIPEEQRNV
ALDLVYDRRR EDYDPLQELM RLFEGVSAAS SKEDRLAELA GLPLFERLAQ RIVDGERNGL
DADLDEAMTQ KPPLQIINEH LLAGMKTVGE LFGSGQMQLP FVLQSAEVMK AAVAYLEPHM
ERSDDDSGKG RIVLATVKGD VHDIGKNLVD IILSNNGYEV VNIGIKQPIA TILEVAEDKS
ADVVGMSGLL VKSTVVMKEN LEEMNTRGVA EKFPVLLGGA ALTRSYVEND LAEIYQGEVH
YARDAFEGLK LMDTIMSAKR GEAPDENSPE AIKAREKEAE RKARHQRSKR IAAQRKAAEE
PVEVPERSDV AADIEVPAPP FWGSRIVKGL AVADYTGLLD ERALFLGQWG LRGQRGGEGP
SYEDLVETEG RPRLRYWLDR LSTDGILAHA AVVYGYFPAV SEGNDIVVLT EPKPDAPVRY
RFHFPRQQRG RFLCIADFIR SRELAAERGE VDVLPFQLVT MGQPIADFAN ELFASNAYRD
YLEVHGIGVQ LTEALAEYWH RRIREELKFS GDRAMAAEDP EAKEDYFKLG YRGARFAFGY
GACPDLEDRA KMMALLEPER IGVTLSEELQ LHPEQSTDAF VLHHPEAKYF NV
|
|---|
| |