Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12001 |
Symbol | |
ID | 5222678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 2222377 |
End bp | 2223510 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640606758 |
Product | MCE family lipoprotein LprM |
Protein accession | YP_001287938 |
Protein GI | 148823184 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 269 |
Plasmid unclonability p-value | 0.000209342 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 211 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGATCG GCCTGACCCT GGTGATGATC GCGGCCGTGG TAGCGAGCTG CGGCTGGCGC GGGCTGAATT CGCTGCCGCT GCCCGGCACG CAGGGCAACG GCCCGGGGTC CTTCGCGGTC CAGGCGCAGC TGCCGGATGT CAACAACATC CAGCCGAACT CGCGGGTGCG GGTTGCCGAC GTGACGGTCG GCCACGTCAC GAAAATCGAG CGCCAAGGCT GGCACGCGTT GGTGACCATG CGGCTGGATG GCGACGTCGA TTTGCCCGCC AACGCAACGG CCAAGATCGG CACCACCAGC CTGCTGGGTT CCTACCACAT CGAGCTGGCG CCACCGAAAG GCGAAGCGCG GCAAGGCAAG CTGCGCGACG GTTCACTCAT TGCGCTGTCA CACGGTAGCG CCTACCCAAG CACCGAGCAG ACGCTGGCAG CGCTGTCGCT GGTGCTCAAC GGCGGCGGAC TGGGCCAGGT TCAAGACATC ACCGAGGCGT TGAGCACCGC GTTTGCCGGC CGTGAGCACG ATCTGCGCGG GCTGATTGGG CAGCTGGACA CCTTCACCGC ATACCTCAAC AACCAGTCCG GTGACATCAT CGCGGCCACC GACAGCCTCA ACCGCCTCGT CGGCAAGTTC GCCGACCAGC AACCCGTCTT CGATCGGGCC CTGGCCACCA TCCCCGACGC GCTCGCGGTG CTGGCCGATG AGCGGGACAC GCTCGTCGAG GCTGCCGAGC AGCTGAGCAA GTTCAGCGCC CTGACCGTCG ACTCGGTCAA CAAGACCACC GCGAACCTGG TCACCGAACT GCGGCAACTC GGACCGGTGT TGGAGTCGCT GGCCAATTCC GGTCCGGCGC TGACCCGATC GCTGTCCCTG CTGGCCACGT TCCCGTTCCC GAACGAGACG TTCCAAAATT TCCAGCGCGG CGAATACGCC AACCTGACCG CGATCGTCGA CCTCACGCTC AGCCGCATCG ACCAGGGCCT GTTGACCGGC ACCCGCTGGG AGTGTCATCT GACCCAGCTC GAGCTGCAGT GGGGTCGCAC CATTGGGCAG TTCCCCAGCC CGTGTACCGC GGGCTATCGG GGTACCCCGG GCAATCCGCT GACGATCGCC TACCGCTGGG ATCAGGGGCC CTAG
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Protein sequence | MRIGLTLVMI AAVVASCGWR GLNSLPLPGT QGNGPGSFAV QAQLPDVNNI QPNSRVRVAD VTVGHVTKIE RQGWHALVTM RLDGDVDLPA NATAKIGTTS LLGSYHIELA PPKGEARQGK LRDGSLIALS HGSAYPSTEQ TLAALSLVLN GGGLGQVQDI TEALSTAFAG REHDLRGLIG QLDTFTAYLN NQSGDIIAAT DSLNRLVGKF ADQQPVFDRA LATIPDALAV LADERDTLVE AAEQLSKFSA LTVDSVNKTT ANLVTELRQL GPVLESLANS GPALTRSLSL LATFPFPNET FQNFQRGEYA NLTAIVDLTL SRIDQGLLTG TRWECHLTQL ELQWGRTIGQ FPSPCTAGYR GTPGNPLTIA YRWDQGP
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