Gene TBFG_11870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11870 
Symbol 
ID5222547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2098914 
End bp2100281 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID640606627 
Producthypothetical protein 
Protein accessionYP_001287807 
Protein GI148823053 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones273 
Plasmid unclonability p-value0.0136182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones200 
Fosmid unclonability p-value0.440152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTCA CCGATACCGT CGCCACCATC CTGGCGATCT TGGCGCTCAC CGCAGGCACG 
GGGGTGTTCG TCGCGGCCGA ATTCTCGCTG ACCGCGCTGG ACCGCAGCAC CGTGGAGGCC
AACGCCCGCG GCGGCACCAG TCGGGACCGC TTCATCCAGC GCGCACACCA CCGGCTGTCG
TTCCAGCTTT CGGGTGCTCA GTTGGGTATC TCGATCACCA CCTTGGCTAC CGGCTACCTG
ACCGAACCGC TGGTGGCCGA GCTACCGCAT CCTGGGCTGG TCGCAGTCGG AATGTCTGAT
CGGGTGGCCG ACGGTCTTAT CACGTTTTTT GCCCTGGTGA TCGTGACATC GCTGTCGATG
GTCTTCGGCG AGCTGGTCCC CAAGTATCTC GCGGTGGCGC GCCCGCTGCG CACCGCGCGC
TCAGTCGTGG CCGGCCAGGT GCTGTTCTCA CTGCTGCTCA CCCCGGCCAT CCGTCTCACG
AACGGAGCGG CGAACTGGAT CGTGCGTCGA CTTGGCATCG AGCCGGCCGA GGAGCTGCGC
TCAGCTCGCA CACCGCAGGA GCTGGTGTCG TTGGTGCGTA GTTCCGCGCG CAGCGGCGCA
CTCGATGACG CCACGGCGTG GCTGATGCGC CGCTCGCTGC AGTTCGGCGC CCTGACGGCC
GAGGAGCTGA TGACGCCACG GTCGAAGATC GTGGCGCTGC AGACCGATGA CACCATCGCC
GACCTGGTTG CGGCCGCGGC CGCATCGGGA TTCTCGCGCT TCCCGGTGGT CGAGGGAGAT
CTCGATGCGA CCGTCGGCAT CGTGCACGTC AAGCAGGTGT TCGAGGTTCC GCCCGGCGAT
CGCGCGCACA CGCTGCTAAC GACGGTCGCC GAGCCGGTCG CGGTGGTGCC CTCGACGCTC
GACGGCGATG CGGTGATGGC GCAGGTCCGC GCCAGTGCGC TACAGACCGC CATGGTTGTG
GACGAGTACG GCGGCACCGC GGGCATGGTA ACCCTGGAGG ACTTGATCGA AGAGATCGTG
GGCGACGTCC GCGACGAACA CGACGATGCG ACACCGGATG TGGTGGCAGC CGGCAACGGA
TGGCGGGTCT CGGGTCTGCT ACGCATCGAC GAGGTGGCCA GCGCCACCGG CTATCGAGCC
CCCGACGGTC CGTACGAGAC GATCGGCGGG TTGGTGCTTC GAGAGCTCGG CCACATCCCG
GTGGCCGGCG AAACGGTCGA GCTGACTGCC TTGGACCAGG ACGGACTTCC CGACGACTCG
ATGCGGTGGT TAGCCACCGT GATCCAGATG GACGGGCGCC GGATCGACTT GTTGGAGTTG
ATCAAAATGG GCGGCCATGC CGACCCCGGG TCGGGGCGGG GCCGCTGA
 
Protein sequence
MNLTDTVATI LAILALTAGT GVFVAAEFSL TALDRSTVEA NARGGTSRDR FIQRAHHRLS 
FQLSGAQLGI SITTLATGYL TEPLVAELPH PGLVAVGMSD RVADGLITFF ALVIVTSLSM
VFGELVPKYL AVARPLRTAR SVVAGQVLFS LLLTPAIRLT NGAANWIVRR LGIEPAEELR
SARTPQELVS LVRSSARSGA LDDATAWLMR RSLQFGALTA EELMTPRSKI VALQTDDTIA
DLVAAAAASG FSRFPVVEGD LDATVGIVHV KQVFEVPPGD RAHTLLTTVA EPVAVVPSTL
DGDAVMAQVR ASALQTAMVV DEYGGTAGMV TLEDLIEEIV GDVRDEHDDA TPDVVAAGNG
WRVSGLLRID EVASATGYRA PDGPYETIGG LVLRELGHIP VAGETVELTA LDQDGLPDDS
MRWLATVIQM DGRRIDLLEL IKMGGHADPG SGRGR