| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11819 |
|---|
| Symbol | |
|---|
| ID | 5222497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 2035043 |
|---|
| End bp | 2036224 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640606577 |
|---|
| Product | PPE family protein |
|---|
| Protein accession | YP_001287758 |
|---|
| Protein GI | 148823004 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG5651] PPE-repeat proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 309 |
|---|
| Plasmid unclonability p-value | 0.240142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 222 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTG GGGCGTTGCC GCCGGAGGTC AATTCGGTGC GGATGTATGC CGGTCCTGGC
TCGGCACCAA TGGTCGCTGC GGCGTCGGCC TGGAACGGGT TGGCCGCGGA GCTGAGTTCG
GCGGCCACCG GTTATGAGAC GGTGATCACT CAGCTCAGCA GTGAGGGGTG GCTAGGTCCG
GCGTCAGCGG CGATGGCCGA GGCAGTTGCG CCGTATGTGG CGTGGATGAG TGCCGCTGCG
GCGCAAGCCG AGCAGGCGGC CACACAGGCC AGGGCCGCCG CGGCCGCTTT TGAGGCGGCG
TTTGCCGCGA CGGTGCCTCC GCCGTTGATC GCGGCCAACC GGGCTTCGTT GATGCAGCTG
ATCTCGACGA ATGTCTTTGG TCAGAACACC TCGGCGATCG CGGCCGCCGA AGCTCAGTAC
GGCGAGATGT GGGCCCAAGA CTCCGCGGCG ATGTATGCCT ACGCGGGCAG TTCGGCGAGC
GCCTCGGCGG TCACGCCGTT TAGCACGCCG CCGCAGATTG CCAACCCGAC CGCTCAGGGT
ACGCAGGCCG CGGCCGTGGC CACCGCCGCC GGTACCGCCC AGTCGACGCT GACGGAGATG
ATCACCGGGC TACCCAACGC GCTGCAAAGC CTCACCTCAC CTCTGTTGCA GTCGTCTAAC
GGTCCGCTGT CGTGGCTGTG GCAGATCTTG TTCGGCACGC CCAATTTCCC CACCTCAATT
TCGGCACTGC TGACCGACCT GCAGCCCTAC GCGAGCTTCT TCTATAACAC CGAGGGCCTG
CCGTACTTCA GCATCGGCAT GGGCAACAAC TTCATTCAGT CGGCCAAGAC CCTGGGATTG
ATCGGCTCGG CGGCACCGGC TGCGGTCGCG GCTGCTGGGG ATGCCGCCAA GGGCTTGCCT
GGACTGGGCG GGATGCTCGG TGGCGGGCCG GTGGCGGCGG GTCTGGGCAA TGCGGCTTCG
GTTGGCAAGC TGTCGGTGCC GCCGGTGTGG AGTGGACCGT TGCCCGGGTC GGTGACTCCG
GGGGCTGCTC CGCTACCGGT GAGTACGGTC AGTGCCGCCC CGGAGGCGGC GCCCGGAAGC
CTGTTGGGCG GCCTGCCGCT AGCTGGTGCG GGCGGGGCCG GCGCGGGTCC ACGCTACGGA
TTCCGTCCCA CCGTCATGGC TCGCCCACCC TTCGCCGGAT AG
|
|---|
| Protein sequence | MDFGALPPEV NSVRMYAGPG SAPMVAAASA WNGLAAELSS AATGYETVIT QLSSEGWLGP
ASAAMAEAVA PYVAWMSAAA AQAEQAATQA RAAAAAFEAA FAATVPPPLI AANRASLMQL
ISTNVFGQNT SAIAAAEAQY GEMWAQDSAA MYAYAGSSAS ASAVTPFSTP PQIANPTAQG
TQAAAVATAA GTAQSTLTEM ITGLPNALQS LTSPLLQSSN GPLSWLWQIL FGTPNFPTSI
SALLTDLQPY ASFFYNTEGL PYFSIGMGNN FIQSAKTLGL IGSAAPAAVA AAGDAAKGLP
GLGGMLGGGP VAAGLGNAAS VGKLSVPPVW SGPLPGSVTP GAAPLPVSTV SAAPEAAPGS
LLGGLPLAGA GGAGAGPRYG FRPTVMARPP FAG
|
|---|
| |