Gene TBFG_11778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11778 
Symbol 
ID5222458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1989026 
End bp1991863 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content63% 
IMG OID640606538 
ProductMmpL family membrane protein 
Protein accessionYP_001287721 
Protein GI148822967 
COG category[R] General function prediction only 
COG ID[COG2409] Predicted drug exporters of the RND superfamily 
TIGRFAM ID[TIGR00833] Transport protein 


Plasmid Coverage information

Num covering plasmid clones90 
Plasmid unclonability p-value0.00000000000000786949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones112 
Fosmid unclonability p-value0.0000000000113435 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACCGCCA TTGGACGACT TATCCATCGC TACGCGATAT GGATCGTCGG CGTCTGGGCG 
CTCGCGGCCA TCATCGGGAA TAACTTTGCC CCGCCACTCG AGCAGGTCAT CACCGCCGAG
GATCAGCCGT TCTCGCCGGC TGGCACCGCC ACTTCGCGTG CCGTGGAACG GTCAGCGGCG
GCCTTCTCCC AAGCGCCCGG CGACAACATC GGATATCTCG TGCTGGAGCG AAACGGAGTC
CTCAACGACC AGGACCGGGC TTACTACGAT GCGCTGGTCG TGGCCCTACG CCGTGATTCC
CGCCACGTCA TCGAGGTGGT GGACTGGTGG GGAACCCCGG CCATCGCGGA GGTCGCCCGC
AGCGACGACC ATCACGCGGT GACAGCTGCC CTGCGCTTTG GGGGCATGGT CGGAACGTCG
CAAGCCGGGG AGTCGATAAC CGCCGCGCGC AGCATCGTTA CCCAACTGCA TCCCCCCGAC
GGTTTGCACG TATTCGTCAC CGGTCCTGGC GCCACCATCG TGGACGAGTT CGCGGCAATC
GACAGACAGA CCCAGCTCAT TACGGCAACG ACAATCGTGG TGTTACTGAT CCTCTTGTTG
ATCGTCTACC GATCCGCGAT CACCGCGACG GTGCCGTTGT TGTCGGTCGT CGTTTCCCTA
GCCGTGGCCA AGCCGATCGT TTCCGTCCTT GTCGACCGCG ATTTCATCGG GATATCCCTG
TTTTCCCTCG GACTTAGCGT TGCGGTGGTT GTCGGCGCGG GAACCGGCTT CGCGATGTTC
CTGATCGGGC GTTACCACGA ACGACGAAGG CAACATATTG CCCCGGCGGC GGCGCTGGCA
GACGCGTACC GCGGGGTGGC GCCGGCGATC GCGGGTGCGA CGTTCATCGT GGTCACATCG
CTGGGCGCTG TGGGATGGCT GAGCCTGGCA CGGATCGGTA TGTTCGCAAC AACCGGAATC
CTTTGCTCGA TTGGCGTTCT TGCAGTGGGC CTGGCCGCAC TGACGTTGAC GCCAGCTCTC
GTCGCGCTGG CCAGCCGTGC CAACCTCCTC AAACCGCCAC AACACAAGCG CATACAGCGC
CAATTTCGGC GACTCGGCAC ACATGTGGCG CGCTGGCCGG CGCCGATATT GGTAGCCAGC
GGTGTGTTCG TACTCATCAT GATGATCGCG CTCCCTAGGG TGCCGATCGG CTGGGACGAA
GCCGCGGCAA CCCCGTCCGC GGCGGAATCC AATCGCGGTT ACCGGGCGGC CGATCGCCAC
TTTGCCCCGA ACCAACTGCT GCCCACCCAG GTGATGATCG AGACCGACCA CGACATCCGC
AATCCCGCCG GTCTGACCGC GATCGAACGA ATCACTGCCG CGATCATGGC TATTGGCGGT
GTGCGCATGG TGCAGTCGGC GAGTCATCCC AACGGAATGG TGTCCAAGCA GGCTGCCTTG
ACAGCATCGG CGGGGAATCT CGGTGATCAG CTCGACGAAT TTTCCGATCA GCTCACATCC
AGGCAGGCAA CGTTCACCAA TCTCGAAGCT GCGGTCCGCG ACGTGGTGTC AGCCCTCGAT
CTGGTTCAGG CTGGCATACG ACAGGATGGC TATGGACTTG GCCAGGTCAG TCGGGCCGTC
CGGCTGATGC AACAGGCGAT AACCAAACTT CAGGGCAGCG CCGGTGACGT CTTCGACATA
TTCGACCCGT TGCGTCGTTT CGTCGCGGCG ATACCCGAGT GCCGGGCCAA CCCCGTGTGT
TCGGTCGCCC AAGAGGTGGT GCAGTGGGCA AACACCGTCA CCGAGAGCTG TGCGAAGCTG
GCCGATGCGG CAGGGCAGCT CGCGCGGGGG ATCGCTGATG TCGCCTCGGC GACATCGGGT
GTGTCCGGGC TACCGAATGC CCTGGACGGC ATTGGAGGTC AGCTGGCGCA GGTACGAGAA
TCGGCCGCAG GCGTTCAAGA GTTACTTAAC AATGTCGGCG CAGCACCATT GCGAGAGCTT
CCCGACTATT TACGCGAACT TGCCGCCGTC TCCCAGAGTG CGCCGGGCGT GGATCTCTAC
GCCGCTCGGC GAATTCTGAC CGACCCGAAT ATGCGCGCGG TCTTGGACTA TTTTGTCTCA
CCAAACGGCC ATGCAACGCG TTTACTCGTC TACGGCGACG GGAGCGAGTG GGGTGACGAT
GGCGCCCAAC GCGCTCGCGC GATCGTGACT GCGGTGGCCG AGGAAACCGA CGAGGGCACG
CTGCGACCCA CCGCTGTTGA GCTGACCGGC GTTGGACCGG CTACCCGTGA CCTGCAGGAT
CTGGTGGGCA GTGACCTGAC CTTGCTGGCG GTCATCACAC TGGCCGTTAT CTTCGCGATA
GCCGCACTGC TGCTGCGCAG TCCGCTTGCC GGGCTTGTGG TCGTCGGCAC AATCGCGACA
TCGTATATCT GTGCGCTTGG CGCCAGCGTA GTGATTTGGA AACACATACT TGGCGATAAC
TTGCACTGGT CGGTATTGCC GATTGCGTTT GTTTTGCTGA TATCGGTGGG TTCGGCCTAC
AACCTGCTCT TCGCGCTGCG CATCCGCGAA GAAAGTTCTG CCGGGCCACG AACCAGTGTC
ATCCGAGCGT TCGCGGCGAC CGGAATGGTA GTCACGGCCG CTGGAATCGT GTTTGGCACA
ACGATGTTCG CGCTGGCCGC GAGTACCTCG CTGAGCGTGG CACAGATCGG CGTTACCGTT
GGCATGGGGT TATTGCTGGA CGCCCTTGTG ATACGAGGCT TTGTCCTGCC GGCCCTGATG
GTTTTGCTGG GCCGCTGGCT GTGGTGGCCG CGCCGATCGG TTAGCAACCG GCAGGTACCC
GAGCCGTCGC CGGCCTAA
 
Protein sequence
MTAIGRLIHR YAIWIVGVWA LAAIIGNNFA PPLEQVITAE DQPFSPAGTA TSRAVERSAA 
AFSQAPGDNI GYLVLERNGV LNDQDRAYYD ALVVALRRDS RHVIEVVDWW GTPAIAEVAR
SDDHHAVTAA LRFGGMVGTS QAGESITAAR SIVTQLHPPD GLHVFVTGPG ATIVDEFAAI
DRQTQLITAT TIVVLLILLL IVYRSAITAT VPLLSVVVSL AVAKPIVSVL VDRDFIGISL
FSLGLSVAVV VGAGTGFAMF LIGRYHERRR QHIAPAAALA DAYRGVAPAI AGATFIVVTS
LGAVGWLSLA RIGMFATTGI LCSIGVLAVG LAALTLTPAL VALASRANLL KPPQHKRIQR
QFRRLGTHVA RWPAPILVAS GVFVLIMMIA LPRVPIGWDE AAATPSAAES NRGYRAADRH
FAPNQLLPTQ VMIETDHDIR NPAGLTAIER ITAAIMAIGG VRMVQSASHP NGMVSKQAAL
TASAGNLGDQ LDEFSDQLTS RQATFTNLEA AVRDVVSALD LVQAGIRQDG YGLGQVSRAV
RLMQQAITKL QGSAGDVFDI FDPLRRFVAA IPECRANPVC SVAQEVVQWA NTVTESCAKL
ADAAGQLARG IADVASATSG VSGLPNALDG IGGQLAQVRE SAAGVQELLN NVGAAPLREL
PDYLRELAAV SQSAPGVDLY AARRILTDPN MRAVLDYFVS PNGHATRLLV YGDGSEWGDD
GAQRARAIVT AVAEETDEGT LRPTAVELTG VGPATRDLQD LVGSDLTLLA VITLAVIFAI
AALLLRSPLA GLVVVGTIAT SYICALGASV VIWKHILGDN LHWSVLPIAF VLLISVGSAY
NLLFALRIRE ESSAGPRTSV IRAFAATGMV VTAAGIVFGT TMFALAASTS LSVAQIGVTV
GMGLLLDALV IRGFVLPALM VLLGRWLWWP RRSVSNRQVP EPSPA