Gene TBFG_11683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11683 
Symbol 
ID5222363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1886616 
End bp1887677 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID640606443 
Productchalcone synthase pks11 
Protein accessionYP_001287628 
Protein GI148822874 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones313 
Plasmid unclonability p-value0.133328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones194 
Fosmid unclonability p-value0.163848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TCGCGGGTGT GTTCGGTGCG TTGCCGCCGC ATCGCTATAG CCAAAGTGAG 
ATCACTGATT CGTTTGTCGA GTTTCCCGGC CTTAAGGAAC ACGAGGAGAT CATTCGGCGT
TTGCATGCCG CCGCCAAGGT CAACGGTCGA CACCTGGTGC TGCCGCTGCA GCAATACCCG
TCGCTGACCG ACTTCGGCGA CGCCAACGAG ATCTTTATCG AGAAGGCTGT CGACCTTGGC
GTCGAGGCCT TGCTGGGCGC GCTCGATGAT GCCAACCTGC GCCCCAGCGA CATCGACATG
ATCGCCACCG CAACCGTCAC CGGCGTCGCG GTGCCGTCTT TGGATGCCCG GATCGCCGGG
CGGCTTGGTC TGCGCCCCGA CGTGCGGCGG ATGCCGTTGT TCGGTCTGGG CTGCGTGGCA
GGGGCGGCGG GCGTGGCCCG CCTGCGCGAC TACCTGCGTG GCGCGCCCGA CGACGTCGCG
GTTCTGGTCT CGGTTGAGCT TTGCTCGCTG ACGTATCCCG CGGTCAAACC AACCGTGTCG
AGTCTGGTCG GGACCGCACT GTTCGGCGAC GGAGCAGCCG CGGTGGTCGC CGTCGGCGAC
CGGCGCGCCG AGCAGGTTCG CGCTGGCGGA CCGGACATCT TGGACTCGCG CAGCAGCCTG
TACCCCGACT CGCTGCACAT CATGGGTTGG GATGTCGGTT CCCATGGCCT GCGGCTGCGG
CTTTCCCCGG ACCTGACGAA CCTGATCGAA CGGTACCTAG CCAATGACGT CACCACGTTT
CTTGATGCCC ATCGGCTGAC CAAAGACGAC ATCGGCGCCT GGGTGAGCCA TCCCGGTGGT
CCCAAGGTCA TCGACGCCGT CGCCACGAGC CTCGCGCTGC CTCCCGAGGC GCTCGAGCTG
ACCTGGCGCT CGCTGGGCGA GATCGGCAAC CTTTCGTCGG CCTCGATACT GCATATTTTG
CGCGACACCA TCGAAAAGCG GCCACCCAGC GGAAGCGCCG GGCTGATGCT GGCGATGGGT
CCTGGTTTCT GCACGGAACT CGTCTTACTG CGCTGGCGCT GA
 
Protein sequence
MSVIAGVFGA LPPHRYSQSE ITDSFVEFPG LKEHEEIIRR LHAAAKVNGR HLVLPLQQYP 
SLTDFGDANE IFIEKAVDLG VEALLGALDD ANLRPSDIDM IATATVTGVA VPSLDARIAG
RLGLRPDVRR MPLFGLGCVA GAAGVARLRD YLRGAPDDVA VLVSVELCSL TYPAVKPTVS
SLVGTALFGD GAAAVVAVGD RRAEQVRAGG PDILDSRSSL YPDSLHIMGW DVGSHGLRLR
LSPDLTNLIE RYLANDVTTF LDAHRLTKDD IGAWVSHPGG PKVIDAVATS LALPPEALEL
TWRSLGEIGN LSSASILHIL RDTIEKRPPS GSAGLMLAMG PGFCTELVLL RWR