Gene TBFG_11678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11678 
Symbol 
ID5222358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1869550 
End bp1870611 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID640606438 
Productchalcone synthase pks10 
Protein accessionYP_001287623 
Protein GI148822869 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones246 
Plasmid unclonability p-value0.0000000441245 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones215 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCA TCGCAGGTGT GTTCGGCGCG TTGCCGCCGT ATCGCTATTC ACAACGCGAG 
CTCACCGACT CGTTTGTCAG CATCCCGGAT TTCGAGGGCT ACGAAGACAT CGTTCGCCAG
CTGCACGCCA GCGCCAAAGT CAACAGCCGC CACCTGGTCT TGCCGCTGGA GAAATACCCG
AAGCTGACCG ACTTCGGCGA GGCGAACAAG ATTTTCATCG AAAAAGCCGT GGACTTGGGC
GTGCAAGCCC TGGCGGGGGC ACTCGACGAG TCCGGTCTGC GACCCGAGGA TCTCGACGTG
TTGATCACCG CCACGGTCAC CGGACTGGCG GTGCCGTCGC TGGATGCCCG GATCGCCGGG
CGGCTGGGGC TGCGCGCCGA TGTCCGGAGG GTGCCGCTGT TCGGGCTGGG CTGCGTGGCC
GGGGCGGCCG GGGTCGCCCG GCTGCACGAC TACCTGCGCG GGGCCCCGGA CGGCGTTGCC
GCGTTGGTCT CGGTCGAGCT GTGTTCACTC ACGTATCCGG GATACAAGCC GACGCTGCCG
GGCCTTGTCG GCAGTGCGTT GTTTGCTGAC GGCGCCGCGG CGGTGGTGGC CGCAGGTGTG
AAGCGCGCCC AGGACATCGG CGCCGACGGG CCGGACATCC TGGATTCGCG CAGCCATCTG
TACCCCGACT CGCTGCGCAC CATGGGATAC GACGTCGGCT CGGCCGGGTT CGAGCTCGTC
CTATCACGGG ACTTGGCGGC CGTGGTCGAG CAGTATCTGG GCAATGACGT CACCACCTTC
CTGGCTTCGC ACGGCCTGAG CACCACCGAC GTCGGCGCCT GGGTCACCCA TCCCGGGGGA
CCCAAGATCA TCAACGCCAT CACCGAGACC CTCGACCTGT CGCCGCAGGC TCTCGAGCTG
ACGTGGCGCT CGTTGGGCGA AATCGGGAAT CTGTCGTCAG CGTCGGTGCT GCATGTGCTG
CGTGACACCA TCGCCAAACC GCCCCCCAGC GGAAGTCCCG GGTTGATGAT CGCCATGGGC
CCAGGCTTCT GTTCCGAACT CGTGTTGCTG CGCTGGCACT GA
 
Protein sequence
MSVIAGVFGA LPPYRYSQRE LTDSFVSIPD FEGYEDIVRQ LHASAKVNSR HLVLPLEKYP 
KLTDFGEANK IFIEKAVDLG VQALAGALDE SGLRPEDLDV LITATVTGLA VPSLDARIAG
RLGLRADVRR VPLFGLGCVA GAAGVARLHD YLRGAPDGVA ALVSVELCSL TYPGYKPTLP
GLVGSALFAD GAAAVVAAGV KRAQDIGADG PDILDSRSHL YPDSLRTMGY DVGSAGFELV
LSRDLAAVVE QYLGNDVTTF LASHGLSTTD VGAWVTHPGG PKIINAITET LDLSPQALEL
TWRSLGEIGN LSSASVLHVL RDTIAKPPPS GSPGLMIAMG PGFCSELVLL RWH