Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11678 |
Symbol | |
ID | 5222358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1869550 |
End bp | 1870611 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640606438 |
Product | chalcone synthase pks10 |
Protein accession | YP_001287623 |
Protein GI | 148822869 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3424] Predicted naringenin-chalcone synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 246 |
Plasmid unclonability p-value | 0.0000000441245 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 215 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTCA TCGCAGGTGT GTTCGGCGCG TTGCCGCCGT ATCGCTATTC ACAACGCGAG CTCACCGACT CGTTTGTCAG CATCCCGGAT TTCGAGGGCT ACGAAGACAT CGTTCGCCAG CTGCACGCCA GCGCCAAAGT CAACAGCCGC CACCTGGTCT TGCCGCTGGA GAAATACCCG AAGCTGACCG ACTTCGGCGA GGCGAACAAG ATTTTCATCG AAAAAGCCGT GGACTTGGGC GTGCAAGCCC TGGCGGGGGC ACTCGACGAG TCCGGTCTGC GACCCGAGGA TCTCGACGTG TTGATCACCG CCACGGTCAC CGGACTGGCG GTGCCGTCGC TGGATGCCCG GATCGCCGGG CGGCTGGGGC TGCGCGCCGA TGTCCGGAGG GTGCCGCTGT TCGGGCTGGG CTGCGTGGCC GGGGCGGCCG GGGTCGCCCG GCTGCACGAC TACCTGCGCG GGGCCCCGGA CGGCGTTGCC GCGTTGGTCT CGGTCGAGCT GTGTTCACTC ACGTATCCGG GATACAAGCC GACGCTGCCG GGCCTTGTCG GCAGTGCGTT GTTTGCTGAC GGCGCCGCGG CGGTGGTGGC CGCAGGTGTG AAGCGCGCCC AGGACATCGG CGCCGACGGG CCGGACATCC TGGATTCGCG CAGCCATCTG TACCCCGACT CGCTGCGCAC CATGGGATAC GACGTCGGCT CGGCCGGGTT CGAGCTCGTC CTATCACGGG ACTTGGCGGC CGTGGTCGAG CAGTATCTGG GCAATGACGT CACCACCTTC CTGGCTTCGC ACGGCCTGAG CACCACCGAC GTCGGCGCCT GGGTCACCCA TCCCGGGGGA CCCAAGATCA TCAACGCCAT CACCGAGACC CTCGACCTGT CGCCGCAGGC TCTCGAGCTG ACGTGGCGCT CGTTGGGCGA AATCGGGAAT CTGTCGTCAG CGTCGGTGCT GCATGTGCTG CGTGACACCA TCGCCAAACC GCCCCCCAGC GGAAGTCCCG GGTTGATGAT CGCCATGGGC CCAGGCTTCT GTTCCGAACT CGTGTTGCTG CGCTGGCACT GA
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Protein sequence | MSVIAGVFGA LPPYRYSQRE LTDSFVSIPD FEGYEDIVRQ LHASAKVNSR HLVLPLEKYP KLTDFGEANK IFIEKAVDLG VQALAGALDE SGLRPEDLDV LITATVTGLA VPSLDARIAG RLGLRADVRR VPLFGLGCVA GAAGVARLHD YLRGAPDGVA ALVSVELCSL TYPGYKPTLP GLVGSALFAD GAAAVVAAGV KRAQDIGADG PDILDSRSHL YPDSLRTMGY DVGSAGFELV LSRDLAAVVE QYLGNDVTTF LASHGLSTTD VGAWVTHPGG PKIINAITET LDLSPQALEL TWRSLGEIGN LSSASVLHVL RDTIAKPPPS GSPGLMIAMG PGFCSELVLL RWH
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