| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11657 |
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| Symbol | lysS |
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| ID | 5222337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 1843908 |
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| End bp | 1847426 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640606417 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001287602 |
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| Protein GI | 148822848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[S] Function unknown |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II)
[COG2898] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 138 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 195 |
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| Fosmid unclonability p-value | 0.73947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACTCC ACTTAACTGT CCCTGGCCTT CGCCGGGATG GTCGCGGCGT CCAGTCTAAC
AGCCATGACA CGTCATCTAA GACAACGGCC GACATCAGCC GGTGCCCTCA GCACACCGAT
GCGGGGCTAC AAAGGGCTGC AACGCCGGGC ATTTCCCGGC TTTTGGGAAT ATCCTCGCGG
TCTGTGACAC TCACCAAACC TCGCTCGGCC ACCAGGGGAA ACTCCCGGTA TCACTGGGTT
CCCGCGGCAG CCGGCTGGAC CGTCGGCGTG ATCGCGACCC TGTCACTACT GGCCAGTGTG
TCGCCGTTGA TTCGGTGGAT CATCAAGGTT CCGCGCGAAT TCATCAACGA TTATCTGTTC
AACTTCCCCG ACACCAACTT CGCGTGGTCC TTCGTGCTGG CATTGCTGGC CGCCGCGTTA
ACGGCACGCA AACGCATTGC CTGGTTGGTC TTGCTGGCAA ATATGGTCCT GGCCGCCGTG
GTCAACGCCG CCGAGATCGC AGCGGGCGGC AACACCGCCG CCGAGAGCTT CGGGGAGAAT
CTCGGATTCG CCGTGCATGT TGTGGCAATC GTCGTTCTGG TGCTGGGCTA TCGGGAGTTC
TGGGCCAAGG TCCGCAGGGG CGCGCTGTTT CGGGCGGCTG CGGTGTGGCT TGCCGGCGCG
GTGGTCGGAA TCGTGGCGTC TTGGGGTCTG GTCGAACTGT TTCCGGGATC ACTAGCGCCG
GACGAGCGGT TGGGTTACGC GGCCAACCGG GTGGTCGGAT TCGCCCTCGC CGATCCCGAT
CTGTTCACCG GCAGACCGCA CGTCTTCCTC AACGCGATCT TCGGGTTGTT CGGCGCGTTC
GCGTTGATCG GGGCTGCGAT CGTCTTGTTC CTATCTCAGC GCGCTGACAA TGCGCTGACC
GGAGAGGACG AATCCGCTAT CCGCGGGTTA TTGGATTTGT ATGGGAAGGA CGACTCACTG
GGCTACTTCG CCACCCGTCG CGACAAGTCG GTGGTATTCG CATCCAGCGG CCGCGCCTGT
ATCACCTACC GTGTCGAGGT CGGTGTCTGC CTAGCCAGCG GCGACCCGGT AGGCGACCAC
AGAGCATGGC CGCAGGCCGT CGACGCGTGG CTGCGGCTGT GCCAGACCTA CGGCTGGGCA
CCCGGCGTGA TGGGCGCCAG TTCACAAGGG GCTCAGACAT ATCGCGAAGC GGGCCTAACC
GCGCTCGAGC TGGGCGATGA GGCCATCCTG CGGCCAGCCG ATTTCAAGTT GTCCGGCCCG
GAGATGCGCG GGGTGCGCCA GGCCGTGACG CGGGCCCGGC GGGCGGGGTT GACGGTGCGC
ATCCGGCGGC ATCGCGACAT TGCCGAAGAC GAGATGGCGC AGACCATCAC ACGGGCGGAT
TCCTGGCGCG ACACCGAGAC CGAGCGCGGC TTCTCGATGG CGCTGGGCCG CCTCGGCGAC
CCCGCGGACT CCGACTGCCT GCTGGTGGAG GCGATTGATC CGCACAACCA GGTGCTGGCA
ATGCTGTCGC TGGTGCCGTG GGGAACCACC GGTGTCTCCC TGGATTTGAT GCGTCGTTCT
CCACAATCCC CGAACGGCAC TATCGAACTT ATGGTCAGCG AACTCGCCTT GCACGCTGAA
AGCCTTGGTA TCACTCGTAT TTCGTTGAAC TTCGCGGTGT TTCGCGCGGC CTTCGAGCAG
GGCGCCCAAC TCGGCGCCGG CCCGGTTGCC CGGTTGTGGC GGGGGCTGCT GGTCTTCTTC
TCACGGTGGT GGCAGCTCGA GACGCTCTAC CGCTCCAACA TGAAGTACCA ACCCGAATGG
GTACCGCGCT ACGCCTGCTA CGAAGACGCC CGAGTGATTC CCCGAGTGGG CGTCGCCTCG
GTGATCGCAG AGGGGTTCCT CGTGCTGCCG TTCAGCCGGC GCAACCGAGT ACACACGGGG
CATCATCCGG CAGTGCCCGA GCGGTTGGCG GCCACCGGCC TATTGCATCA CGACGGCTCG
GCACCGGACG TGAGCGGGCT GCGGCAAGTA GGCCTCACCA ATGGCGACGG GGTCGAGCGG
CGGCTACCCG AGCAGGTGCG AGTTCGGTTC GACAAGCTAG AGAAGCTGCG GAGCAGCGGC
ATTGACGCCT TTCCCGTGGG CCGGCCGCCC AGTCACACGG TGGCACAGGC GCTGGCCGCA
GACCACCAGG CTAGCGTGTC GGTGTCCGGA CGCATCATGC GAATACGTAA CTACGGTGGT
GTGTTGTTCG CCCAGCTGCG CGACTGGTCG GGCGAAATGC AAGTGCTGCT GGATAATTCA
CGCCTGGACC AGGGCTGCGC GGCCGACTTC AACGCGGCGA CCGATCTGGG TGATCTGGTG
GAGATGACCG GACACATGGG CGCCAGCAAG ACCGGAACTC CATCGTTGAT CGTCAGCGGC
TGGCGCCTGA TCGGTAAGTG TTTGCGACCG TTGCCGAATA AGTGGAAGGG GCTACTGGAT
CCCGAAGCCC GAGTCCGGAC CCGTTACCTC GACCTGGCGG TCAACGCTGA GTCCCGTGCG
CTGATCACCG CTCGCAGCAG CGTGCTGCGC GCTGTGCGCG AGACGCTGTT CGCAAAGGGA
TTCGTCGAGG TCGAAACGCC GATCCTACAG CAGCTGCACG GCGGCGCCAC CGCCCGACCG
TTCGTCACGC ACATCAACAC GTATTCCATG GATCTGTTCC TGCGCATCGC ACCAGAGCTC
TACCTCAAGC GCCTGTGCGT CGGCGGCGTG GAACGGGTAT TCGAGCTCGG CCGTGCCTTT
CGCAACGAGG GCGTCGACTT CAGCCACAAC CCGGAGTTCA CCCTACTGGA GGCCTATCAA
GCACACGCCG ACTACCTTGA GTGGATTGAC GGCTGCCGCG AACTCATCCA GAACGCCGCC
CAGGCCGCCA ACGGGGCGCC CATCGCCATG CGGCCCCGGA CGGACAAGGG TTCCGACGGC
ACCCGCCACC ACCTCGAACC GGTCGACATC TCCGGGATAT GGCCGGTGCG GACGGTGCAT
GATGCGATCT CGGAAGCACT CGGTGAACGC ATCGACGCCG ATACCGGCTT GACCACTCTC
CGCAAGCTGT GCGACGCCGC CGGTGTCCCC TATCGGACCC AATGGGATGC CGGCGCGGTC
GTGCTCGAGC TATACGAGCA CCTGGTGGAG TGCCGCACCG AGCAACCGAC GTTCTACATC
GACTTTCCGA CATCGGTGTC ACCGTTGACC CGACCGCATC GCAGCAAGCG CGGTGTCGCC
GAGCGTTGGG ACCTGGTGGC GTGGGGTATC GAGCTGGGCA CCGCCTACAG CGAGCTGACC
GACCCGGTGG AGCAACGGCG CCGCCTGCAG GAGCAGTCCC TGCTGGCCGC CGGCGGAGAC
CCCGAGGCGA TGGAACTCGA CGAAGACTTC CTGCAAGCGA TGGAGTACGC CATGCCGCCC
ACCGGCGGCT TGGGCATGGG CATTGACCGG GTGGTCATGC TGATCACTGG GCGCAGCATT
CGCGAAACAC TGCCCTTTCC GTTGGCAAAA CCGCATTAG
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| Protein sequence | MGLHLTVPGL RRDGRGVQSN SHDTSSKTTA DISRCPQHTD AGLQRAATPG ISRLLGISSR
SVTLTKPRSA TRGNSRYHWV PAAAGWTVGV IATLSLLASV SPLIRWIIKV PREFINDYLF
NFPDTNFAWS FVLALLAAAL TARKRIAWLV LLANMVLAAV VNAAEIAAGG NTAAESFGEN
LGFAVHVVAI VVLVLGYREF WAKVRRGALF RAAAVWLAGA VVGIVASWGL VELFPGSLAP
DERLGYAANR VVGFALADPD LFTGRPHVFL NAIFGLFGAF ALIGAAIVLF LSQRADNALT
GEDESAIRGL LDLYGKDDSL GYFATRRDKS VVFASSGRAC ITYRVEVGVC LASGDPVGDH
RAWPQAVDAW LRLCQTYGWA PGVMGASSQG AQTYREAGLT ALELGDEAIL RPADFKLSGP
EMRGVRQAVT RARRAGLTVR IRRHRDIAED EMAQTITRAD SWRDTETERG FSMALGRLGD
PADSDCLLVE AIDPHNQVLA MLSLVPWGTT GVSLDLMRRS PQSPNGTIEL MVSELALHAE
SLGITRISLN FAVFRAAFEQ GAQLGAGPVA RLWRGLLVFF SRWWQLETLY RSNMKYQPEW
VPRYACYEDA RVIPRVGVAS VIAEGFLVLP FSRRNRVHTG HHPAVPERLA ATGLLHHDGS
APDVSGLRQV GLTNGDGVER RLPEQVRVRF DKLEKLRSSG IDAFPVGRPP SHTVAQALAA
DHQASVSVSG RIMRIRNYGG VLFAQLRDWS GEMQVLLDNS RLDQGCAADF NAATDLGDLV
EMTGHMGASK TGTPSLIVSG WRLIGKCLRP LPNKWKGLLD PEARVRTRYL DLAVNAESRA
LITARSSVLR AVRETLFAKG FVEVETPILQ QLHGGATARP FVTHINTYSM DLFLRIAPEL
YLKRLCVGGV ERVFELGRAF RNEGVDFSHN PEFTLLEAYQ AHADYLEWID GCRELIQNAA
QAANGAPIAM RPRTDKGSDG TRHHLEPVDI SGIWPVRTVH DAISEALGER IDADTGLTTL
RKLCDAAGVP YRTQWDAGAV VLELYEHLVE CRTEQPTFYI DFPTSVSPLT RPHRSKRGVA
ERWDLVAWGI ELGTAYSELT DPVEQRRRLQ EQSLLAAGGD PEAMELDEDF LQAMEYAMPP
TGGLGMGIDR VVMLITGRSI RETLPFPLAK PH
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