Gene TBFG_11654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11654 
SymboluvrA 
ID5222334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1839132 
End bp1842050 
Gene Length2919 bp 
Protein Length972 aa 
Translation table11 
GC content66% 
IMG OID640606414 
Productexcinuclease ABC subunit A 
Protein accessionYP_001287599 
Protein GI148822845 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones183 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones195 
Fosmid unclonability p-value0.550141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACC GCCTGATCGT CAAGGGTGCG CGCGAACACA ATCTGCGCAG CGTCGACCTC 
GACCTGCCCC GCGACGCGCT GATCGTCTTC ACCGGGTTAT CCGGATCGGG CAAGTCCTCG
CTCGCGTTCG ACACCATCTT CGCCGAGGGG CAGCGGCGTT ACGTGGAGTC GCTGTCGGCC
TACGCCCGCC AATTTCTCGG GCAGATGGAC AAGCCGGACG TCGACTTCAT CGAGGGGCTG
TCTCCGGCGG TGTCCATCGA CCAGAAGTCG ACCAACCGCA ACCCACGATC GACGGTCGGG
ACCATCACCG AGGTGTACGA CTACCTGCGG CTGTTGTATG CGCGCGCGGG CACGCCGCAC
TGCCCGACCT GCGGGGAGCG AGTCGCGCGC CAAACCCCGC AACAAATCGT CGATCAGGTG
CTGGCCATGC CGGAGGGCAC TCGGTTTCTG GTGCTGGCCC CGGTGGTGCG TACCCGCAAG
GGCGAGTTCG CCGATCTGTT CGATAAGCTC AACGCCCAGG GCTACAGCCG GGTGCGGGTC
GACGGTGTGG TGCATCCGCT GACCGATCCG CCGAAGCTGA AAAAGCAGGA AAAGCACGAC
ATCGAGGTGG TGGTGGACCG TCTCACCGTC AAGGCCGCCG CCAAGCGGCG GCTCACCGAT
TCGGTGGAAA CCGCGCTGAA TTTGGCCGAC GGGATCGTGG TGCTCGAATT CGTCGATCAT
GAACTGGGTG CACCGCATCG CGAGCAGCGG TTCTCCGAGA AGCTGGCCTG CCCCAACGGG
CACGCGCTGG CCGTCGACGA CCTGGAGCCG CGGTCGTTCT CGTTCAACTC GCCCTACGGC
GCCTGCCCCG AATGCAGTGG TCTGGGCATC CGCAAGGAGG TCGACCCGGA GCTGGTGGTG
CCCGATCCGG ATCGCACCCT GGCGCAGGGT GCGGTGGCGC CGTGGTCGAA CGGCCACACC
GCGGAGTACT TCACCCGGAT GATGGCCGGC CTTGGCGAGG CGCTCGGGTT CGACGTCGAC
ACGCCCTGGC GCAAGCTGCC GGCCAAGGCC CGCAAGGCGA TTCTGGAAGG CGCCGACGAG
CAGGTGCACG TGCGCTACCG CAACCGCTAC GGACGCACCC GGTCGTATTA CGCCGATTTC
GAGGGTGTGC TGGCGTTCCT GCAACGCAAG ATGTCCCAAA CCGAGTCCGA GCAGATGAAG
GAGCGCTACG AGGGTTTCAT GCGGGACGTG CCCTGCCCGG TGTGTGCGGG CACCCGGCTC
AAGCCCGAGA TTCTGGCGGT GACGCTGGCT GGGGAGTCCA AGGGGGAGCA CGGCGCCAAG
TCCATCGCCG AGGTGTGTGA GCTGTCGATC GCCGACTGCG CGGACTTCCT GAACGCGCTC
ACGCTGGGTC CGCGCGAGCA AGCGATCGCC GGGCAGGTGC TCAAGGAGAT CCGGTCGCGG
CTCGGGTTTC TGCTCGACGT CGGGCTGGAG TACCTGTCGC TGTCCCGGGC GGCGGCCACG
CTGTCCGGCG GTGAGGCACA ACGTATCCGG CTGGCCACCC AGATCGGCTC CGGCCTGGTG
GGTGTGCTCT ACGTGCTCGA CGAGCCGTCC ATCGGGCTGC ACCAGCGCGA CAACCGTCGT
CTTATCGAAA CCCTCACCCG GTTACGGGAT TTGGGGAACA CTTTGATCGT CGTCGAGCAC
GACGAGGACA CCATCGAGCA TGCGGACTGG ATCGTCGACA TCGGCCCGGG GGCCGGTGAG
CACGGTGGCC GCATCGTGCA CAGCGGGCCC TACGATGAAC TGCTACGCAA CAAGGATTCG
ATCACCGGCG CCTACCTGTC CGGCCGGGAA AGCATTGAGA TACCGGCGAT TCGGCGTTCC
GTCGACCCCC GTCGTCAACT CACCGTCGTC GGCGCCCGCG AGCACAACTT GCGCGGGATC
GATGTGTCTT TCCCGCTGGG TGTGCTGACC TCGGTGACCG GTGTCTCGGG TTCGGGCAAG
TCGACGTTGG TCAACGACAT CCTGGCCGCG GTGCTGGCCA ACCGCCTCAA CGGCGCCCGG
CAGGTCCCCG GCCGGCACAC CCGGGTCACC GGGCTGGACT ATCTGGACAA GCTGGTGCGG
GTGGACCAAT CGCCGATCGG GCGCACACCG CGATCCAACC CGGCCACCTA CACCGGTGTG
TTCGACAAGA TCCGCACCCT GTTCGCCGCC ACCACCGAGG CCAAGGTCCG CGGCTATCAA
CCCGGACGAT TCTCGTTCAA CGTCAAGGGC GGTCGCTGCG AGGCCTGCAC CGGCGACGGC
ACCATCAAGA TCGAGATGAA CTTCCTGCCC GACGTGTACG TGCCGTGCGA GGTCTGCCAG
GGGGCCCGGT ACAACCGCGA AACCCTCGAG GTGCACTACA AGGGCAAGAC CGTCTCGGAA
GTGCTGGACA TGTCCATCGA GGAAGCGGCG GAGTTCTTCG AGCCGATCGC CGGCGTCCAT
CGCTATCTAC GCACCCTGGT CGACGTGGGC CTGGGCTACG TGCGGCTCGG CCAGCCCGCG
CCCACGCTGT CCGGCGGTGA GGCCCAGCGG GTCAAGCTGG CCTCGGAGCT GCAGAAGCGC
TCCACCGGGC GCACCGTCTA CATCCTCGAC GAGCCGACGA CGGGACTGCA CTTCGACGAC
ATACGCAAGC TGCTCAACGT GATCAACGGC CTGGTCGACA AGGGCAATAC GGTGATCGTC
ATCGAACATA ACCTGGACGT GAGCAAGACA TCGGATTGGA TCATCGACCT GGGCCCGGAG
GGCGGTGCCG GCGGCGGAAC CGTTGTCGCC CAAGGCACTC CGGAGGACGT TGCCGCGGTG
CCGGCGAGCT ACACCGGGAA GTTTCTCGCT GAGGTCGTCG GCGGCGGTGC CTCGGCCGCC
ACATCGCGGT CGAACAGACG GCGCAACGTC AGCGCCTGA
 
Protein sequence
MADRLIVKGA REHNLRSVDL DLPRDALIVF TGLSGSGKSS LAFDTIFAEG QRRYVESLSA 
YARQFLGQMD KPDVDFIEGL SPAVSIDQKS TNRNPRSTVG TITEVYDYLR LLYARAGTPH
CPTCGERVAR QTPQQIVDQV LAMPEGTRFL VLAPVVRTRK GEFADLFDKL NAQGYSRVRV
DGVVHPLTDP PKLKKQEKHD IEVVVDRLTV KAAAKRRLTD SVETALNLAD GIVVLEFVDH
ELGAPHREQR FSEKLACPNG HALAVDDLEP RSFSFNSPYG ACPECSGLGI RKEVDPELVV
PDPDRTLAQG AVAPWSNGHT AEYFTRMMAG LGEALGFDVD TPWRKLPAKA RKAILEGADE
QVHVRYRNRY GRTRSYYADF EGVLAFLQRK MSQTESEQMK ERYEGFMRDV PCPVCAGTRL
KPEILAVTLA GESKGEHGAK SIAEVCELSI ADCADFLNAL TLGPREQAIA GQVLKEIRSR
LGFLLDVGLE YLSLSRAAAT LSGGEAQRIR LATQIGSGLV GVLYVLDEPS IGLHQRDNRR
LIETLTRLRD LGNTLIVVEH DEDTIEHADW IVDIGPGAGE HGGRIVHSGP YDELLRNKDS
ITGAYLSGRE SIEIPAIRRS VDPRRQLTVV GAREHNLRGI DVSFPLGVLT SVTGVSGSGK
STLVNDILAA VLANRLNGAR QVPGRHTRVT GLDYLDKLVR VDQSPIGRTP RSNPATYTGV
FDKIRTLFAA TTEAKVRGYQ PGRFSFNVKG GRCEACTGDG TIKIEMNFLP DVYVPCEVCQ
GARYNRETLE VHYKGKTVSE VLDMSIEEAA EFFEPIAGVH RYLRTLVDVG LGYVRLGQPA
PTLSGGEAQR VKLASELQKR STGRTVYILD EPTTGLHFDD IRKLLNVING LVDKGNTVIV
IEHNLDVSKT SDWIIDLGPE GGAGGGTVVA QGTPEDVAAV PASYTGKFLA EVVGGGASAA
TSRSNRRRNV SA