| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11637 |
|---|
| Symbol | |
|---|
| ID | 5222316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1817081 |
|---|
| End bp | 1818664 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640606396 |
|---|
| Product | transmembrane ATP-binding protein ABC transporter cydD |
|---|
| Protein accession | YP_001287582 |
|---|
| Protein GI | 148822828 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 316 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 186 |
|---|
| Fosmid unclonability p-value | 0.107343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTGCG GGGTCGGGAT CTCCGGCTGC GCCATCGGCT CGGCGATCGT GTTGGCAAGC
ATCGTCGCCG GCGTCATCGA CCCCGCCAAC CCTGGGATGG CTGGCCTGCG TCGTTGGCTA
GGGCCACTGT CAATCCTGTT GGTGCTGTGG GGGTTGCGTG CGTCGATTCA GTGGCTACAA
GCGCGCCTGG CCCAGCGCGG CGCCAGCGCA GTGATCGCCG ACCTGTCCGG TCAGGTGCTG
ACCGCGGTAA CCGCCCGCCG ACCCAGCCAA CTGGCTGCGC AGCGAGACGC CGCCGCGGTG
CTGATTACCC GGGGCCTGGA CGGCTTGCGG CCCTACTTCA CCGGCTATTT GCCCACGTTG
CTGCTGGCCG CGATCCTGAC CCCGGCCACC GTCGCCGTGA TCGGGCTCTA TGACTTGAAG
TCAATGGCCA TTGTGGTGAT CACACTGCCC CTGATACCGA TCTTCATGGT GCTGATCGGG
CTGGCTACCA CTAACCCCTC GGCGGCCGCG CTGGCGGCCA TGACCGCCGT CCAGGCCCGG
TTGTTAGACC TGATTGCCGG CATCCCCACC CTGCGGGCGC TGGGCCGTGC TTCCGGCCCG
GAACAACGCA TCGCGGAACT GTCTGCTGAC CACCGGCGGT CGGCGATGGC GACGCTGCGG
ATCGCGTTCT TGTCGGCCCT GGTGCTCGAA TTGCTGGCCA CGCTGGGCGT GGCCCTGGTC
GCGGTGGGCA TCGGGCTACG GCTGGTCTTC GGGGAGATGA GCCTGACGGC CGGTTTGACG
GTGCTGCTAT TGGCGCCGGA GGTGTACTGG CCGCTGCGTC GCGTTGGGGT CCAGTTTCAT
GCCGCAGCTG ACGGCAGAAC CGCGGCCGAC AAGGCATTCG CCCTCCTCGG CGAGTCACCC
TCACCAACAC CCGGCCGACG AACGGTCACC GCGCGCGGCG GGGTGATTCG CCTGGAGAGA
CTCAGTGTCA GAGGCCGCGA CGGCCGCGCA CCGTATGATC TCACCGCAGA CATCGAACCC
GGTCGGGTGA CGGTGCTGAC CGGCCGAAAC GGCGCCGGCA AGAGCACTAC GCTGCAAGCG
ATCGCCGGGC TCACCGCACC GTCGTCAGGA CGAATCACGG TCGCCGGAGT CGACGTCACC
AACCTGGCAC CGGCTGCCTG GTGGCGGCAA CTGTCGTGGC TGCCGCAGCG GCCGGTGCTG
GTCCCAGGAA CCGTCCGCCA CAACCTGGTT CTGCTGGGCC CTGTGGATGA TCTCGAGCGT
GCCTGCGCAG CAGCCGGATT CGACGCTGTA CTAGACGAGT TGCCCCGCGG GCTGGATACC
GTGCTGGGGC GCGGTGGTGT CGGGTTATCC CTGGGGCAGC GGCAACGGCT GGGCCTGGCC
CGCGCGCTCG GATCACCGGC TGCGGTGCTG CTGCTCGACG AGCCCACCGC GCACCTGGAC
GCCCGCACCG AACAACACGT GTTGGGCGCC ATTGTCGAGC GTGCCCGCGC GGGTGCGACG
GTGCTGGTCG TCGCCCATCG CCAGCAGGTC GCCGCGGCCG GTGACCGGGT CGTCGAAGTG
AACTCGGATG GTTTCCGACG ATGA
|
|---|
| Protein sequence | MACGVGISGC AIGSAIVLAS IVAGVIDPAN PGMAGLRRWL GPLSILLVLW GLRASIQWLQ
ARLAQRGASA VIADLSGQVL TAVTARRPSQ LAAQRDAAAV LITRGLDGLR PYFTGYLPTL
LLAAILTPAT VAVIGLYDLK SMAIVVITLP LIPIFMVLIG LATTNPSAAA LAAMTAVQAR
LLDLIAGIPT LRALGRASGP EQRIAELSAD HRRSAMATLR IAFLSALVLE LLATLGVALV
AVGIGLRLVF GEMSLTAGLT VLLLAPEVYW PLRRVGVQFH AAADGRTAAD KAFALLGESP
SPTPGRRTVT ARGGVIRLER LSVRGRDGRA PYDLTADIEP GRVTVLTGRN GAGKSTTLQA
IAGLTAPSSG RITVAGVDVT NLAPAAWWRQ LSWLPQRPVL VPGTVRHNLV LLGPVDDLER
ACAAAGFDAV LDELPRGLDT VLGRGGVGLS LGQRQRLGLA RALGSPAAVL LLDEPTAHLD
ARTEQHVLGA IVERARAGAT VLVVAHRQQV AAAGDRVVEV NSDGFRR
|
|---|
| |