Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11395 |
Symbol | |
ID | 5222074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 1541382 |
End bp | 1543343 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640606154 |
Product | hypothetical protein |
Protein accession | YP_001287340 |
Protein GI | 148822586 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 455 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 209 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCG AAATGGACTG GGACAAAACG GTCGGTGCGG CCGAGGATGT ACGACGCATT TTCGAGCACA TCCCTGCGAT TCTGGTTGGC CTCGAGGGGC CTGACCATCG CTTTGTCGCA GTGAACGCGG CCTATCGCGG CTTCAGTCCA TTGCTTGACA CCGTGGGACA GCCCGCTCGG GAGGTCTATC CCGAACTGGA GGGTCAGCAG ATCTACGAAA TGTTGGACCG GGTCTATCAA ACCGGTGAGC CGCAATCAGG ATCGGAGTGG CGACTACAAA CTGATTACGA CGGTTCCGGA GTTGAGGAAC GATACTTCGA CTTTGTCGTC ACACCGCGCC GCCGGGCGGA CGGATCGATC GAGGGCGTGC AGCTCATTGT GGACGACGTC ACCAGCCGAG TGCGAGCCCG GCAGGCGGCC GAGGCGCGCG TGGAGGAACT GTCCGAGCGC TATCGCAATG TGCGCGATTC AGCCACCGTT ATGCAGCAGG CGTTGCTGGC CGCGTCGGTG CCCGTGGTTC CCGGCGCCGA CATAGCCGCC GAGTACCTGG TCGCCGCCGA GGATACCGCG GCCGGCGGCG ACTGGTTCGA CGCGCTGGCC CTCGGGGATC GGTTGGTGCT CGTCGTTGGC GACGTCGTGG GCCACGGCGT GGAGGCCGCA GCGGTCATGT CGCAATTACG TACGGCGTTA CGCATGCAGA TCTCGGCGGG GTACACGGTC GTCGAGGCGC TTGAGGCAGT GGACCGCTTC CATAAACAGG TACCTGGATC GAAATCGGCC ACCATGTGTG TCGGCTCGCT CGACTTCACC TCGGGCGAAT TCCAGTACTG CACAGCCGGA CACCCGCCAC CGCTGCTGGT GACCGCGGAC GCGAGTGCGC GGTATGTCGA ACCAACCGGC GCGGGTCCGC TCGGCAGCGG AACCGGATTT CCAGTGCGCA GTGAAGTGCT CAACATCGGC GACGCGATCC TCTTTTACAC TGACGGCCTG ATCGAGCGGC CCGGTCGGCC GCTCGAGGCC AGCACCGCCG AATTTGCCGA CCTAGCGGCC AGCATCGCCA GCGGCAGTGG CGGCTTTGTG CTCGACGCCC CGGCACGGCC CATCGACCGA CTCTGTTCGG ACACACTTGA ATTGCTGCTG CGGTCCACCG GCTACAACGA CGATGTGACC CTGCTTGCGA TGCAACGCCG GGCGCCAACG CCGCCGCTGC ACATAACGCT GGATGCGACG ATCAACGCGG CACGAACCGT TCGAGCCCAG CTTCGTGAGT GGCTGGCAGA GATCGGCGCC GACCACTCCG ACATCGCCGA TATCGTGCAC GCGATCTCCG AATTCGTCGA GAACGCGGTC GAACACGGAT ACGCCACGGA CGTCTCCAAG GGCATCGTTG TCGAGGCCGC GCTGGCCGGC GACGGCAACG TGCGGGCATC GGTAATCGAC CGGGGCCAAT GGAAGGACCA CCGCGACGGC GCCCGTGGCC GTGGGCGCGG CCTGGCGATG GCCGAGGCCC TAGTGTCGGA GGCGCGCATC ATGCATGGCG CCGGCGGAAC GACTGCCACA CTTACGCATC GCCTGTCGCG GCCGGCGCGG TTTGTCACCG ACACGATGGT TCGCCGGGCA GCTTTCCAAC AAACCATCGA CAGCGAATTC GTCTCCCTAG TTGAATCCGG CCGCATCGTT GTCCGGGGCG ACGTCGATTC GACCACCGCA GCCACATTGG ACCGCCAGAT CGCCGTCGAA AGCCGTTCTG GCATAGCACC CGTGACGATC GACCTCAGTG CCGTCACCCA CCTTGGTTCG GCCGGCGTCG GCGCCCTCGC TGCCGCTTGT GACCGGGCAC GCAAACAGGG GACCGAGTGC GTGCTGGTGG CCCCACCCGG CAGCCCGGCG CACCATGTCT TGTCGCTGGT CCAGCTGCCC GTTGTCGGCG CCGACACCGA GGACATCTTC GCCCAGGAGT AG
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Protein sequence | MAAEMDWDKT VGAAEDVRRI FEHIPAILVG LEGPDHRFVA VNAAYRGFSP LLDTVGQPAR EVYPELEGQQ IYEMLDRVYQ TGEPQSGSEW RLQTDYDGSG VEERYFDFVV TPRRRADGSI EGVQLIVDDV TSRVRARQAA EARVEELSER YRNVRDSATV MQQALLAASV PVVPGADIAA EYLVAAEDTA AGGDWFDALA LGDRLVLVVG DVVGHGVEAA AVMSQLRTAL RMQISAGYTV VEALEAVDRF HKQVPGSKSA TMCVGSLDFT SGEFQYCTAG HPPPLLVTAD ASARYVEPTG AGPLGSGTGF PVRSEVLNIG DAILFYTDGL IERPGRPLEA STAEFADLAA SIASGSGGFV LDAPARPIDR LCSDTLELLL RSTGYNDDVT LLAMQRRAPT PPLHITLDAT INAARTVRAQ LREWLAEIGA DHSDIADIVH AISEFVENAV EHGYATDVSK GIVVEAALAG DGNVRASVID RGQWKDHRDG ARGRGRGLAM AEALVSEARI MHGAGGTTAT LTHRLSRPAR FVTDTMVRRA AFQQTIDSEF VSLVESGRIV VRGDVDSTTA ATLDRQIAVE SRSGIAPVTI DLSAVTHLGS AGVGALAAAC DRARKQGTEC VLVAPPGSPA HHVLSLVQLP VVGADTEDIF AQE
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