Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11183 |
Symbol | pimE |
ID | 5221860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1288756 |
End bp | 1290051 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640605937 |
Product | mannosyltransferase |
Protein accession | YP_001287128 |
Protein GI | 148822374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 229 |
Plasmid unclonability p-value | 0.0000000655823 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 219 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCGCA CCCTGATCGA CGGCCCGGTG CGCTCGGCGA TCGCTAAAGT CAGGCAGATA GACACCACCT CATCCACCCC GGCGGCCGCC AGGCGCGTGA CCTCACCACC GGCCCGGGAG ACACGCGCCG CCGTGCTGCT ACTGGTCCTC AGCGTCGGTG CGCGACTCGC CTGGACCTAT CTGGCGCCCA ACGGCGCAAA CTTCGTCGAC CTGCACGTTT ACGTGAGCGG TGCAGCGTCC CTCGACCATC CCGGCACCCT GTATGGCTAC GTCTACGCTG ATCAGACCCC GGACTTCCCG CTGCCGTTCA CCTATCCGCC GTTTGCGGCT GTGGTCTTCT ACCCGTTGCA TTTGGTGCCG TTCGGTCTGA TCGCGCTGCT GTGGCAAGTA GTGACGATGG CCGCGCTCTA CGGCGCGGTT CGGATCAGCC AGCGCCTGAT GGGGGGCACC GCTGAGACCG GTCATTTCGC CGCGATGTTA TGGACGGCGA TCGCCATCTG GATCGAGCCG TTGCGCAGCA CCTTTGACTA TGGGCAGATC AACGTGCTGC TGATGCTGGC GGCGCTTTGG GCGGTCTACA CCCCGCGGTG GTGGCTATCG GGACTGCTGG TCGGGGTGGC CTCGGGTGTC AAGTTGACGC CGGCGATTAC CGCTGTCTAC CTCGTCGGCG TTCGGCGGTT GCATGCGGCC GCATTTTCGG TGGTCGTGTT CCTTGCCACC GTCGGCGTGT CGCTACTGGT CGTCGGCGAT GAAGCCCGCT ACTACTTCAC CGACCTGTTG GGCGACGCAG GCCGGGTTGG GCCCATCGCC ACCTCCTTCA ATCAATCCTG GCGCGGCGCG ATTTCCCGGA TTCTCGGTCA CGACGCCGGT TTTGGTCCGC TGGTTCTGGC TGCGATCGCC AGTACGGCGG TATTGGCCAT CCTGGCCTGG CGTGCGCTCG ACAGGTCCGA TCGGCTGGGC AAACTATTGG TGGTCGAGTT GTTCGGCCTG CTGCTCTCGC CGATCTCCTG GACTCACCAC TGGGTGTGGC TAGTGCCGCT GATGATCTGG CTGATTGACG GGCCAGCGCG TGAGCGCCCG GGCGCCCGGA TTTTGGGCTG GGGCTGGTTG GTGTTGACCA TCGTCGGCGT GCCGTGGTTG CTGAGCTTTG CTCAACCGAG CATCTGGCAA ATCGGCCGGC CGTGGTATTT GGCCTGGGCC GGTCTGGTCT ACGTGGTGGC GACGCTGGCG ACCTTGGGCT GGATCGCCGC CTCCGAGCGT TACGTGCGCA TTCGGCCGCG GCGCATGGCC AATTAG
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Protein sequence | MCRTLIDGPV RSAIAKVRQI DTTSSTPAAA RRVTSPPARE TRAAVLLLVL SVGARLAWTY LAPNGANFVD LHVYVSGAAS LDHPGTLYGY VYADQTPDFP LPFTYPPFAA VVFYPLHLVP FGLIALLWQV VTMAALYGAV RISQRLMGGT AETGHFAAML WTAIAIWIEP LRSTFDYGQI NVLLMLAALW AVYTPRWWLS GLLVGVASGV KLTPAITAVY LVGVRRLHAA AFSVVVFLAT VGVSLLVVGD EARYYFTDLL GDAGRVGPIA TSFNQSWRGA ISRILGHDAG FGPLVLAAIA STAVLAILAW RALDRSDRLG KLLVVELFGL LLSPISWTHH WVWLVPLMIW LIDGPARERP GARILGWGWL VLTIVGVPWL LSFAQPSIWQ IGRPWYLAWA GLVYVVATLA TLGWIAASER YVRIRPRRMA N
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