| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11103 |
|---|
| Symbol | |
|---|
| ID | 5221780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1213526 |
|---|
| End bp | 1214254 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640605857 |
|---|
| Product | hemolysin-like protein |
|---|
| Protein accession | YP_001287048 |
|---|
| Protein GI | 148822294 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 124 |
|---|
| Plasmid unclonability p-value | 3.2817e-49 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 202 |
|---|
| Fosmid unclonability p-value | 0.398095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC AGGCCGACAC CGCCACCACC GCGGAAGCAA GGACGCCGGC CCACGCTGCC
CACCACCTCG TCGAAGGTGT CGCCCGTGTC CTGACCAAAC CGCGCTTCCG CGGCTGGATC
CACGTGTATT CCGCCGGCAC CGCGGTGTTG GCCGGTGCGT CGCTGGTCGC GGTGTCGTGG
GCGGTGGGTT CCGCCAAGGC GGGCCTGACG ACGCTGGCCT ACACCGCGGC CACGATCACC
ATGTTCACCG TCAGCGCCAC TTATCACCGG GTCAATTGGA AATCCGCGAC GGCCCGCAAC
TGGATGAAGC GGGCCGACCA CTCGATGATC TTCGTGTTCA TCGCCGGCAG CTACACGCCG
TTCGCGCTGC TGGCCTTGCC GGCCCACGAC GGGCGCGTGG TGTTGTCGAT TGTTTGGGGC
GGTGCGATCG CCGGAATCTT GCTGAAGATG TGTTGGCCGG CGGCGCCGCG CTCGGTCGGG
GTTCCGCTGT ACCTGTTGCT GGGTTGGGTG GCGGTCTGGT ACACCGCGAC GATCCTGCAC
AACGCCGGGG TGACCGCGTT GGTGTTGCTG TTTGTTGGCG GCGCGTTGTA CAGCATCGGC
GGCATTCTCT ACGCGGTACG CTGGCCCGAC CCGTGGCCGA CGACGTTCGG CTACCACGAG
TTCTTCCACG CCTGCACCGC GGTGGCGGCG ATCTGCCACT ACATCGCGAT GTGGTTCGTG
GTGTTCTGA
|
|---|
| Protein sequence | MSGQADTATT AEARTPAHAA HHLVEGVARV LTKPRFRGWI HVYSAGTAVL AGASLVAVSW
AVGSAKAGLT TLAYTAATIT MFTVSATYHR VNWKSATARN WMKRADHSMI FVFIAGSYTP
FALLALPAHD GRVVLSIVWG GAIAGILLKM CWPAAPRSVG VPLYLLLGWV AVWYTATILH
NAGVTALVLL FVGGALYSIG GILYAVRWPD PWPTTFGYHE FFHACTAVAA ICHYIAMWFV
VF
|
|---|
| |