Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10957 |
Symbol | |
ID | 5221631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1052238 |
End bp | 1054172 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640605708 |
Product | bifunctional 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/cyclase/dehydrase |
Protein accession | YP_001286902 |
Protein GI | 148822148 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 334 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 200 |
Fosmid unclonability p-value | 0.761321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGG TGACGTATCG AAGTGACCAC GGCGAACGAA CGGGAGTGCT TTCCGGTGAC GCCATCTACG CGATGCCGCC GGACGTGTCG TTGCTGGATC TGGTCGGGCG CGGCGCCGAC GGTCTGCGCA CGGCGGGCGA ACGGGCAGTG CGCTCACCGG CCGCGGTGGT AGCGCTCGAC GAGGTTACGC TGGCGGCGCC GATTCCGCGC CCGCCGTCGA TCCGGGACTC GTTGTGCTTT CTGGACCACA TGCGTAACTG CCAGGAAGCG ATGGGGGGCG GCCGGGTGCT CATGGATACT TGGTACCGCA TCCCGGCGTT CTACTTCGCG TGCCCGTCAA CGGTTTTGGG ACCGTACGAC GACGCACCCA CCGCACCCGG AAGTGCGTGG CAGGACTTCG AATTGGAGAT CGCGGCGGTT ATCGGAACCA GCGGCAAAGA CTTGACCGTC GAGCAGGCCG AACGGTCGAT CATCGGCTAT ACCATTTTCA ACGACTGGTC CGCACGGGAC CTGCAGATGC TGGAGGGCCA GCTGCGCATC GGACAGGCCA AGGGCAAAGA CAGCGGTATC ACCCTGGGCC CCTATCTGGT CACACCGGAT GAGCTGGAGC CCTATTGCCG GGGCGGGAAG CTAAGCTTGC GGGTGATCGC CTTGGTCAAC GGCACCGTGA TCGGATCGGG GTCGACCGCA CAGATGGACT GGAGCTTCGG CGAAGTCATC GCCTATGCCT CGCGGGGGGT GACGCTGACC CCGGGTGACG TGTTCGGCTC GGGCACGGTG CCCACCTGCA CGCTCGTCGA GCACCTCAGG CCACCGGAAT CATTCCCGGG CTGGCTGCAC GACGGCGACG TGGTCACCCT CCAGGTCGAA GGGCTGGGCG AGACGAGGCA GACCGTCCGG ACGAGCGGCA CTCCTTTTCC GTTGGCTCTT CGGCCGAATC CGGACGCCGA ACCCGACCGG CGCGGGGTCA ACCCGGCACC GACGCGGGTG CCGTTTACCC GCGGGCTGCA CGAAGTCGCC GACCGGGTAT GGGCGTGGAC GCTGCCCGAC GGGGGATACG GCTTCAGCAA CGCCGGGCTG GTCGCCGGGG ACGGCGCGTC GCTGCTCGTG GATACCCTGT TCGACCTGGC ACTGACACGC GAGATGTTGG CCGCGATGAA GCCGGTCACC GAGCGGGCGC CCATCACCGA CGCCCTGATC ACGCACTCCA ACGGCGACCA CACGCACGGC ACTCAACTGT TGGACCGCTC AGTGCGCATC ATCGCCGCCA AGGGCACCTC CGAGGAGATC GAGCATGGCC CGGCACCGGA GATGCTAGCC CGGATCCAAA CCGCCGACCT GGGCCCCGTT GCGACGCGGT ATCTGCGTGA TCGCTTCGGT CACTTTGACT TCAGCGGCAT CAAGCTGCGC AACGCCGACC TGACGTTCGA CCGCGACCTG GCCATCGAGC TCGGCGGCCG GCGAGTCGAC CTGCTCAACC TCGGTCCCGC GCACACCACC GCCGACTCGG TCGTGCACGT GGCCGACGCC GGTGTGCTGT TCGCCGGGGA TCTGCTGTTC ATCGGTTGCA CCCCGATTGT GTGGGCGGGC CCGATCGCCA ACTGGGTGGC GGCCTGCGAC GCGATGATCG CGCTGGACGC GCCCACGGTG GTGCCTGGGC ATGGTCCGGT CACCGGCCCG GACGGGATCC GTGCCGTCCG TGGCTATCTG GCGCACATCG CCGAACAGGC CGAGGCGGCC TACCGCAAGG GGCTATCGTT GCCCGAGGCC GTCGAGACCA TCGACCTGGG CGAGTACGCG AGCTGGCTGG ACTCCGAACG GGTAGTGGTC AACGTCTACC AGCGTTACCG CGAATTGGAT CCCGACACCC CGCGCCAGGA CTTGCTGGCG TTGCTGGTGA TGCAGGCCGA ATGGGCGGCG CGCCACTGTA CGTAG
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Protein sequence | MKWVTYRSDH GERTGVLSGD AIYAMPPDVS LLDLVGRGAD GLRTAGERAV RSPAAVVALD EVTLAAPIPR PPSIRDSLCF LDHMRNCQEA MGGGRVLMDT WYRIPAFYFA CPSTVLGPYD DAPTAPGSAW QDFELEIAAV IGTSGKDLTV EQAERSIIGY TIFNDWSARD LQMLEGQLRI GQAKGKDSGI TLGPYLVTPD ELEPYCRGGK LSLRVIALVN GTVIGSGSTA QMDWSFGEVI AYASRGVTLT PGDVFGSGTV PTCTLVEHLR PPESFPGWLH DGDVVTLQVE GLGETRQTVR TSGTPFPLAL RPNPDAEPDR RGVNPAPTRV PFTRGLHEVA DRVWAWTLPD GGYGFSNAGL VAGDGASLLV DTLFDLALTR EMLAAMKPVT ERAPITDALI THSNGDHTHG TQLLDRSVRI IAAKGTSEEI EHGPAPEMLA RIQTADLGPV ATRYLRDRFG HFDFSGIKLR NADLTFDRDL AIELGGRRVD LLNLGPAHTT ADSVVHVADA GVLFAGDLLF IGCTPIVWAG PIANWVAACD AMIALDAPTV VPGHGPVTGP DGIRAVRGYL AHIAEQAEAA YRKGLSLPEA VETIDLGEYA SWLDSERVVV NVYQRYRELD PDTPRQDLLA LLVMQAEWAA RHCT
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