| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10956 |
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| Symbol | |
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| ID | 5221630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 1049962 |
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| End bp | 1052241 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640605707 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001286901 |
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| Protein GI | 148822147 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 386 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 204 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCGG CGTCGGAGCA ACGGGTGACG CTGACCAACG CCGACAAGGT GCTCTATCCC
GCCACCGGGA CCACAAAGTC CGATATCTTC GACTACTACG CCGGTGTTGC CGAAGTCATG
CTCGGCCACA TCGCGGGACG GCCGGCGACG CGCAAGCGCT GGCCTAACGG CGTCGACCAA
CCCGCGTTCT TCGAAAAGCA GTTGGCGTTG TCGGCGCCGC CTTGGCTGTC ACGTGCAACG
GTGGCGCACC GGTCCGGGAC GACGACCTAT CCGATCATCG ATAGCGCAAC CGGGCTGGCC
TGGATCGCCC AACAGGCGGC GCTGGAGGTG CACGTGCCGC AGTGGCGGTT TGTCGCCGAG
CCCGGATCAG GTGAGTTAAA TCCGGGCCCG GCAACGCGTT TGGTGTTCGA CCTGGACCCG
GGCGAAGGCG TGATGATGGC CCAGCTGGCC GAGGTGGCGC GCGCGGTTCG TGATCTTCTC
GCCGATATCG GGTTGGTCAC CTTCCCGGTC ACCAGCGGCA GCAAGGGATT GCATCTGTAC
ACACCGCTGG ATGAGCCGGT GAGCAGCAGG GGAGCCACGG TGTTGGCCAA GCGCGTCGCG
CAGCGATTGG AGCAGGCGAT GCCCGCGTTG GTCACCTCGA CCATGACCAA AAGCCTGCGG
GCCGGGAAGG TGTTTGTGGA CTGGAGCCAG AACAGCGGCT CGAAGACCAC CATCGCGCCG
TACTCACTAC GTGGCCGGAC GCATCCGACC GTCGCGGCGC CACGCACCTG GGCGGAGCTC
GACGACCCCG CACTGCGTCA GCTCTCCTAC GACGAGGTGC TGACCCGGAT TGCCCGCGAC
GGCGATCTGC TCGAGCGGCT GGATGCCGAC GCTCCGGTAG CGGACCGGTT GACCCGATAC
CGCCGCATGC GCGACGCATC GAAAACTCCC GAGCCGATTC CCACGGCGAA ACCCGTTACC
GGAGACGGCA ATACGTTCGT CATCCAGGAG CATCACGCGC GTCGGCCGCA CTACGATTTC
CGGCTGGAAC GCGACGGCGT GCTGGTCTCG TGGGCGGTAC CGAAAAACCT GCCCGACAAC
ACATCGGTTA ACCATCTAGC GATACACACC GAGGACCACC CGCTGGAATA CGCCACGTTC
GAGGGCGCGA TTCCCAGCGG GGAGTACGGC GCCGGCAAGG TGATCATCTG GGACTCCGGC
ACTTACGACA CCGAGAAGTT CCACGATGAC CCGCACACGG GGGAGGTCAT CGTGAATCTG
CACGGCGGCC GGATCTCTGG GCGTTATGCG CTGATTCGGA CCAACGGCGA TCGGTGGCTG
GCGCACCGCC TAAAGAATCA GAAAGACCAG AAGGTGTTCG AGTTCGACAA TCTGGCCCCA
ATGCTTGCCA CGCACGGCAC GGTGGCCGGT CTAAAGGCCA GCCAGTGGGC GTTCGAAGGC
AAGTGGGACG GCTACCGGTT GCTGGTTGAG GCTGACCACG GCGCCGTGCG GCTGCGGTCC
CGCAGCGGGC GCGATGTCAC CGCCGAGTAT CCGCAATTGC GGGCATTTGC GGAGGATCTC
GCCGATCACC ACGTGGTGCT GGACGGCGAG GCCGTCGTAC TTGACTCCTC TGGTGTGCCC
AGCTTCAGCC AGATGCAGAA TCGGGGCCGC GACACCCGTG TCGAGTTCTG GGCGTTCGAC
CTGCTCTACC TCGACGGCCG CGCGCTGCTA GGCACCCGCT ACCAAGACCG GCGTAAGCTG
CTCGAAACCC TAGCTAACGC AACCAGTCTC ACCGTTCCCG AGCTGCTGCC CGGTGACGGC
GCCCAAGCGT TTGCGTGCTC GCGCAAGCAC GGCTGGGAGG GCGTGATCGC CAAGAGGCGT
GACTCGCGCT ATCAGCCGGG CCGGCGCTGC GCGTCGTGGG TCAAGGACAA GCACTGGAAC
ACCCAGGAAG TCGTCATTGG TGGCTGGCGC GCCGGGGAAG GCGGGCGCAG CAGTGGCGTC
GGGTCGCTGC TCATGGGCAT CCCCGGTCCA GGTGGGCTGC AGTTCGCCGG GCGGGTCGGT
ACCGGCCTCA GCGAACGCGA ACTGGCCAAC CTCAAGGAGA TGCTGGCGCC GCTGCATACC
GACGAGTCCC CCTTCGACGT ACCACTGCCC GCGCGTGACG CCAAGGGCAT CACATATGTC
AAGCCGGCGC TGGTTGCAGA GGTGCGCTAC AGCGAGTGGA CTCCGGAGGG CCGGCTGCGT
CAATCAAGCT GGCGTGGGCT GCGGCCGGAC AAGAAACCCA GTGAGGTGGT GCGCGAATGA
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| Protein sequence | MGSASEQRVT LTNADKVLYP ATGTTKSDIF DYYAGVAEVM LGHIAGRPAT RKRWPNGVDQ
PAFFEKQLAL SAPPWLSRAT VAHRSGTTTY PIIDSATGLA WIAQQAALEV HVPQWRFVAE
PGSGELNPGP ATRLVFDLDP GEGVMMAQLA EVARAVRDLL ADIGLVTFPV TSGSKGLHLY
TPLDEPVSSR GATVLAKRVA QRLEQAMPAL VTSTMTKSLR AGKVFVDWSQ NSGSKTTIAP
YSLRGRTHPT VAAPRTWAEL DDPALRQLSY DEVLTRIARD GDLLERLDAD APVADRLTRY
RRMRDASKTP EPIPTAKPVT GDGNTFVIQE HHARRPHYDF RLERDGVLVS WAVPKNLPDN
TSVNHLAIHT EDHPLEYATF EGAIPSGEYG AGKVIIWDSG TYDTEKFHDD PHTGEVIVNL
HGGRISGRYA LIRTNGDRWL AHRLKNQKDQ KVFEFDNLAP MLATHGTVAG LKASQWAFEG
KWDGYRLLVE ADHGAVRLRS RSGRDVTAEY PQLRAFAEDL ADHHVVLDGE AVVLDSSGVP
SFSQMQNRGR DTRVEFWAFD LLYLDGRALL GTRYQDRRKL LETLANATSL TVPELLPGDG
AQAFACSRKH GWEGVIAKRR DSRYQPGRRC ASWVKDKHWN TQEVVIGGWR AGEGGRSSGV
GSLLMGIPGP GGLQFAGRVG TGLSERELAN LKEMLAPLHT DESPFDVPLP ARDAKGITYV
KPALVAEVRY SEWTPEGRLR QSSWRGLRPD KKPSEVVRE
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