Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10935 |
Symbol | |
ID | 5221608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1025913 |
End bp | 1027694 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640605685 |
Product | glycine betaine transport integral membrane protein betP |
Protein accession | YP_001286880 |
Protein GI | 148822126 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 337 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 238 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCGA AAGAACGCGG TGACCAGAAC GCCGTCGTCG ACGCCCTGCG GAGTATTCAG CCCGCAGTCT TCATTCCGGC TTCAGTGGTC ATCGTCGCCA TGATCGTCGT TTCCGTGGTG TACTCGAGCG TCGCCGAGAA TGCGTTCGTT CGGCTGAACT CCGCGATCAC CGGCGGCGTC GGGTGGTGGT ACATCCTGGT TGCCACCGGG TTTGTGGTAT TCGCGCTGTA CTGCGGCATT TCCCGGATTG GCACTATCCG GCTGGGCCGC GACGATGAGC TCCCCGAGTT CAGCTTCTGG GCATGGCTGG CAATGCTGTT TAGTGCCGGT ATGGGTATCG GCCTGGTCTT CTACGGGGTG GCCGAGCCGC TCAGCCACTA CCTGCGGCCA CCGCGGTCAC GCGGCGTGCC CGCGCTTACT GATGCGGCGG CTAACCAGGC GATGGCGCTG ACAGTGTTCC ACTGGGGCCT GCACGCCTGG GCAATTTATG TCGTGGTTGG CCTCGGTATG GCGTACATGA CCTATCGGCG GGGTCGCCCC TTGTCGGTGC GCTGGCTGCT GGAGCCGGTC GTGGGTCGGG GCCGTGTAGA GGGCGCCTTG GGGCACGCGG TGGACGTCAT CGCCATTGTC GGAACACTCT TTGGTGTCGC CACGTCACTG GGCTTCGGTA TCACTCAGAT CGCCTCCGGC CTGGAATATC TCGGCTGGAT CCGGGTGGAC AACTGGTGGA TGGTCGGCAT GATCGCCGCC ATCACCGCCA CTGCGACGGC GTCGGTGGTC AGTGGGGTCA GCAAGGGTTT GAAGTGGCTG TCGAACATCA ATATGGCGCT GGCCGCCGCA TTGGCCCTGT TCGTGTTGTT GCTCGGGCCG ACACTTTTCT TGCTGCAGTC GTGGGTGCAA AATTTGGGAG GCTACGTCCA GTCGCTTCCG CAATTCATGC TGCGCACCGC GCCGTTCTCG CACGACGGCT GGCTCGGCGA CTGGACTATC TTCTACTGGG GTTGGTGGAT CAGCTGGGCT CCGTTTGTCG GGATGTTCAT CGCGCGGATT TCGCGGGGAC GGACGATCCG GGAGTTCATC GGGGCGGTGC TGCTCGTTCC CACCGTGATC GCCTCGCTAT GGTTTACGAT CTTCGGTGAC TCGGCGTTGT TGCGGCAACG CAACAACGGC GACATGCTCG TCAACGGGGC GGTAGACACC AACACATCGC TTTTCCGATT GCTGGACGGT TTGCCTATCG GGGCTATTAC CAGCGTTCTT GCTGTGCTGG TGATCGTGTT CTTCTTCGTT ACGTCGTCGG ACTCCGGTTC GTTGGTCATC GACATCTTGT CAGCGGGTGG TGAGCTGGAC CCGCCCAAGC TGACCAGGGT CTACTGGGCG GTGTTGGAGG GGGTAGCCGC GGCCGTTTTG CTCCTGATCG GAGGTGCTGG GTCACTGACC GCGTTGCGGA CGGCCGCTAT TGCCACGGCC CTGCCGTTCT CAATCGTCAT GGTGGTGGCG TGCTATGCGA TGACCAAAGC GTTCCACTTC GACCTGGCCG CCACACCTAG GCTGCTGCAC GTCACCGTGC CTGACGTGGT TGCGGCAGGA AACCGGCGAC GCCACGATAT CTCGGCGACG CTGTCGGGGC TCATTGCCGT CCGTGATGTC GATAGCGGCA CATATATAGT CCACCCCGAC ACCGGCGCTC TCACCGTCAC TGCACCACCA GATCCGTTGG ACGATCATGT TTTTGAGTCT GATCGGCACG TAACGCGAAG AAACACAACA TCATCGAGAT GA
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Protein sequence | MSAKERGDQN AVVDALRSIQ PAVFIPASVV IVAMIVVSVV YSSVAENAFV RLNSAITGGV GWWYILVATG FVVFALYCGI SRIGTIRLGR DDELPEFSFW AWLAMLFSAG MGIGLVFYGV AEPLSHYLRP PRSRGVPALT DAAANQAMAL TVFHWGLHAW AIYVVVGLGM AYMTYRRGRP LSVRWLLEPV VGRGRVEGAL GHAVDVIAIV GTLFGVATSL GFGITQIASG LEYLGWIRVD NWWMVGMIAA ITATATASVV SGVSKGLKWL SNINMALAAA LALFVLLLGP TLFLLQSWVQ NLGGYVQSLP QFMLRTAPFS HDGWLGDWTI FYWGWWISWA PFVGMFIARI SRGRTIREFI GAVLLVPTVI ASLWFTIFGD SALLRQRNNG DMLVNGAVDT NTSLFRLLDG LPIGAITSVL AVLVIVFFFV TSSDSGSLVI DILSAGGELD PPKLTRVYWA VLEGVAAAVL LLIGGAGSLT ALRTAAIATA LPFSIVMVVA CYAMTKAFHF DLAATPRLLH VTVPDVVAAG NRRRHDISAT LSGLIAVRDV DSGTYIVHPD TGALTVTAPP DPLDDHVFES DRHVTRRNTT SSR
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