Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10735 |
Symbol | rpsE |
ID | 5221403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 818197 |
End bp | 818859 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640605480 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001286680 |
Protein GI | 148821926 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 299 |
Plasmid unclonability p-value | 0.0000927793 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 202 |
Fosmid unclonability p-value | 0.43056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGAGC AGCCGGCCGG ACAGGCAGGC ACTACCGACA ACCGTGACGC ACGGGGTGAT CGGGAGGGCC GGCGCCGCGA CAGCGGCCGC GGCAGTCGTG AACGGGATGG CGAGAAGAGC AACTATCTAG AGCGGGTCGT CGCCATCAAC CGCGTCTCCA AGGTGGTCAA GGGTGGTCGG CGCTTCAGCT TCACCGCTTT GGTCATCGTG GGCGACGGTA ACGGGATGGT CGGTGTCGGC TACGGCAAGG CCAAGGAAGT ACCGGCCGCG ATCGCCAAGG GCGTCGAAGA GGCGCGCAAA AGCTTCTTCC GGGCACCGCT GATCGGCGGC ACCATCACGC ACCCGGTGCA GGGCGAGGCG GCCGCCGGTG TGGTGTTGCT ACGGCCGGCC AGCCCGGGTA CCGGTGTGAT CGCCGGTGGT GCGGCCCGCG CGGTGCTGGA ATGTGCGGGG GTGCACGACA TCTTGGCCAA GTCGCTGGGC AGTGACAACG CGATCAATGT GGTGCACGCC ACCGTGGCCG CGCTCAAGCT GCTGCAGCGT CCGGAGGAGG TGGCGGCGCG CCGCGGTTTG CCGATAGAGG ACGTCGCCCC GGCCGGGATG CTGAAGGCGC GTCGGAAAAG TGAAGCGCTG GCCGCCAGCG TTTTGCCGGA TAGAACGATA TAG
|
Protein sequence | MAEQPAGQAG TTDNRDARGD REGRRRDSGR GSRERDGEKS NYLERVVAIN RVSKVVKGGR RFSFTALVIV GDGNGMVGVG YGKAKEVPAA IAKGVEEARK SFFRAPLIGG TITHPVQGEA AAGVVLLRPA SPGTGVIAGG AARAVLECAG VHDILAKSLG SDNAINVVHA TVAALKLLQR PEEVAARRGL PIEDVAPAGM LKARRKSEAL AASVLPDRTI
|
| |