Gene TBFG_10275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10275 
Symbol 
ID5220938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp326583 
End bp328778 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content67% 
IMG OID640605015 
Productacyl-CoA dehydrogenase fadE6 
Protein accessionYP_001286220 
Protein GI148821466 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones307 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones179 
Fosmid unclonability p-value0.0482205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG CTATTACTCC TGAGCATTAT GAGCTGGCCG ATTCGGTGCG TTCCCTGGTG 
GCGCGGGTAG CGCCGTCCGA GGTGCTGCAC GCGGCGCTAG AATCACCGGT CGAAAACCCG
CCGCCTTACT GGCAGGCCGC GGCCGAACAA GGCTTGCAGG GTGTGCATCT GGCCGAGTCG
GTCGGCGGCC AGGGTTTCGG CATCCTCGAG CTAGCGGTGG TGCTTGCCGA GTTCGGCTAC
GGCGCCGTGC CCGGGCCGTT CGTGCCGTCG GCGATCGCCA GCGCGCTGAT CGCAGCCCAT
GATCCGCAAG CCAAAGTCCT CGCCGAACTG GCAACCGGTG CGGCCATCGC CGCCTACGCG
CTAGATTCCG GGCTGACCGC CACCCGCCAT GGCGACGTGC TGGTGATCCG GGGCGAAGTC
CGCGCGGTTC CGGCCGCGGC GCAAGCCTCC GTTCTGGTGC TACCGGTGGC CATCGAAAGC
CGTGACGAGT GGGTTGTACT GCGCAACGAT CAGCTCGAGA TCGAAGCGGT CAAGAGCCTG
GATCCGTTGC GGCCCATCGC GCATGTTCGG GCCAACGCGG TCGACGTCAG CGACGACGCC
CTGCTGAGCA ACCTCACGAT GACGACCGCT CACGCGCTGA TGTCCACCCT GCTGTCCGCT
GAAGCCGTTG GCGTCGCGCG GTGGGCGACC GACACCGCGT CGGCATATGC CAAGATCCGC
GAACAATTCG GCCGGCCGAT CGGGCAATTC CAGGCGATCA AGCACAAGTG CGCCGAGATG
ATCGCTGACA CCGAGCGGGC CACCGCCGCG GTGTGGGACG CGGCGCGAGC CTTAGACGAC
GCGGGCGAAT CTAGCTCCGA CGTCGAATTC GCGGCGGCGG TGGCGGCGAC GCTGGCACCG
GCGACCGCTC AGCGCTGCAC GCAGGACTGC ATTCAGGTGC ACGGCGGCAT CGGCTTCACC
TGGGAGCATG ACACGAACGT CTACTACCGC CGGGCGTTGA TGCTGGCCGC GTGCTTTGGC
CGCGGCTCGG AGTATCCGCA GCGGGTGGTG GACACCGCGA CGACTGCCGG TATGCGTCCG
GTAGACATCG ACCTGGACCC CTCTACCGAG AAGCTGCGGG CCCAGATCCG GGCCGAAGTC
GCCGCGCTGA AGGCGATGCC GCGAGAGCCG CGCACTGTCG CGATCGCCGA AGGTGGGTGG
GTGCTGCCAT ATCTGCCCAA GCCGTGGGGT CGGGCCGCCA GCCCGGTCGA GCAGATCATC
ATCGCCCAGG AGTTCACCGC CGGGCGGGTC AAGCGGCCGC AGATTGCCAT CGCGACGTGG
ATCGTGCCGT CGATCGTCGC GTTCGGAACC GACAATCAGA AGCAGCGCCT CCTGCCGCCA
ACGTTCCGAG GCGACATTTT CTGGTGCCAG CTGTTCTCCG AGCCGGGCGC GGGATCGGAC
CTGGCTAGCC TGGCAACCAA GGCCACCCGG GTCGACGGTG GCTGGCGCAT CACTGGTCAG
AAGATCTGGA CCACCGGCGC GCAGTACTCC CAATGGGGTG CGCTGCTGGC GCGGACGGAC
CCGTCGGCGC CCAAGCACAA CGGCATCACC TACTTCCTGC TGGACATGAA AAGCGAAGGC
GTACAAGTGA AGCCGCTGCG CGAGCTCACG GGTAAGGAGT TTTTCAACAC CGTCTACCTC
GACGACGTGT TCGTCCCCGA CGAGTTGGTG CTCGGGGAGG TGAACCGGGG GTGGGAGGTC
AGCCGCAACA CCCTGACGGC CGAGCGGGTG TCGATCGGCG GCAGCGATTC GACCTTCCTC
CCCACCCTGG GCGAGTTCGT CGACTTCGTT CGCGATTACC GTTTCGAAGG ACAGTTCGAC
CAGGTCGCGC GACACCGTGC CGGGCAATTG ATCGCCGAGG GCCACGCCAC CAAGCTGCTC
AACTTGCGCT CCACGCTGTT GACGCTGGCC GGGGGTGACC CGATGGCGCC GGCGGCGATC
TCCAAGCTGT TGTCCATGCG CACCGGCCAG GGTTATGCCG AATTCGCGGT GTCGTCCTTT
GGCACCGATG CGGTGATCGG CGACACAGAG CGATTGCCCG GCAAGTGGGG CGAGTACCTG
CTAGCCAGCC GGGCCACCAC CATCTACGGG GGCACGTCGG AGGTCCAGCT CAACATCATC
GCCGAGCGGT TGCTGGGCCT ACCCCGCGAC CCGTAA
 
Protein sequence
MSIAITPEHY ELADSVRSLV ARVAPSEVLH AALESPVENP PPYWQAAAEQ GLQGVHLAES 
VGGQGFGILE LAVVLAEFGY GAVPGPFVPS AIASALIAAH DPQAKVLAEL ATGAAIAAYA
LDSGLTATRH GDVLVIRGEV RAVPAAAQAS VLVLPVAIES RDEWVVLRND QLEIEAVKSL
DPLRPIAHVR ANAVDVSDDA LLSNLTMTTA HALMSTLLSA EAVGVARWAT DTASAYAKIR
EQFGRPIGQF QAIKHKCAEM IADTERATAA VWDAARALDD AGESSSDVEF AAAVAATLAP
ATAQRCTQDC IQVHGGIGFT WEHDTNVYYR RALMLAACFG RGSEYPQRVV DTATTAGMRP
VDIDLDPSTE KLRAQIRAEV AALKAMPREP RTVAIAEGGW VLPYLPKPWG RAASPVEQII
IAQEFTAGRV KRPQIAIATW IVPSIVAFGT DNQKQRLLPP TFRGDIFWCQ LFSEPGAGSD
LASLATKATR VDGGWRITGQ KIWTTGAQYS QWGALLARTD PSAPKHNGIT YFLLDMKSEG
VQVKPLRELT GKEFFNTVYL DDVFVPDELV LGEVNRGWEV SRNTLTAERV SIGGSDSTFL
PTLGEFVDFV RDYRFEGQFD QVARHRAGQL IAEGHATKLL NLRSTLLTLA GGDPMAPAAI
SKLLSMRTGQ GYAEFAVSSF GTDAVIGDTE RLPGKWGEYL LASRATTIYG GTSEVQLNII
AERLLGLPRD P