Gene TBFG_10200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10200 
Symbol 
ID5220863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp234834 
End bp236825 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content64% 
IMG OID640604940 
Productzinc metalloprotease 
Protein accessionYP_001286145 
Protein GI148821391 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3590] Predicted metalloendopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones249 
Plasmid unclonability p-value0.409138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones215 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTTG CCATCCCCTC GGGTATCGAC CTGAGCCACA TCGACGCTGA TGCCCGACCC 
CAAGACGACC TGTTCGGCCA CGTTAACGGC CGCTGGCTGG CTGAACACGA GATACCAGCG
GACCGAGCGA CCGACGGCGC CTTCCGTAGC CTGTTCGACC GCGCCGAGAC ACAAGTGCGA
GACCTGATCA TCCAGGCCAG CCAAGCAGGT GCTGCGGTAG GCACCGATGC GCAGCGCATC
GGCGACCTCT ACGCCAGCTT CCTCGACGAG GAAGCCGTCG AGCGCGCAGG GGTGCAACCG
CTGCACGACG AATTGGCCAC GATTGACAGC GCGGCCGACG CCACCGAATT GGCCGCCGCC
CTTGGCACTC TGCAACGTGC CGGCGTGGGC GGCGGCATCG GAGTCTATGT CGATACCGAT
TCCAAAGACT CGACCCGTTA CTTGGTGCAT TTCACCCAAT CCGGCATCGG ATTACCCGAC
GAGTCCTACT ACCGTGACGA GCAACACGCC GCCGTGCTAG CGGCCTACCC GGGGCACATC
GCCCGGATGT TCGGCCTGGT GTACGGGGGC GAGAGCCGTG ACCATGCCAA AACCGCGGAC
CGCATCGTCG CGCTGGAGAC CAAACTCGCC GACGCGCATT GGGATGTGGT GAAGCGCCGC
GACGCCGACC TTGGCTACAA CCTGCGCACG TTTGCCCAGC TGCAGACCGA AGGGGCGGGT
TTCGACTGGG TCAGCTGGGT GACCGCATTG GGGAGCGCTC CGGACGCCAT GACGGAACTG
GTTGTGCGCC AACCTGATTA CCTCGTCACC TTTGCCTCGC TGTGGGCGAG CGTTAACGTT
GAAGACTGGA AATGCTGGGC GCGTTGGCGT TTGATCCGCG CCCGGGCCCC CTGGCTGACC
CGCGCCCTGG TCGCCGAGGA CTTCGAATTC TACGGCCGCA CGCTTACCGG CGCACAGCAG
CTTCGGGACC GTTGGAAGCG TGGGGTGTCA CTGGTGGAGA ACCTGATGGG CGATGCCGTC
GGAAAGCTCT ATGTACAACG CCATTTCCCG CCGGATGCCA AGTCCCGCAT CGACACCCTG
GTGGACAACC TGCAGGAGGC GTATCGGATC AGCATCAGCG AGCTGGATTG GATGACGCCG
CAGACCCGGC AACGCGCGCT AGCGAAGCTG AACAAGTTCA CCGCCAAAGT CGGCTATCCG
ATCAAGTGGC GCGACTACTC GAAGCTGGCG ATCGACCGCG ACGACCTCTA CGGTAACGTC
CAGCGCGGCT ACGCCGTCAA CCATGACCGC GAGCTAGCCA AGCTTTTCGG CCCGGTCGAC
CGCGACGAGT GGTTCATGAC ACCACAAACC GTCAACGCCT ACTACAACCC GGGGATGAAC
GAAATCGTCT TCCCCGCAGC GATTTTACAG CCACCATTTT TCGATCCGCA GGCCGACGAG
GCCGCCAACT ACGGCGGGAT CGGGGCGGTG ATCGGGCACG AGATCGGGCA CGGTTTCGAC
GATCAGGGCG CCAAATACGA CGGCGACGGC AATCTGGTCG ATTGGTGGAC CGACGACGAT
CGCACCGAGT TCGCCGCCCG CACCAAAGCG TTGATCGAGC AGTACCACGC TTACACGCCG
CGCGATCTCG TCGACCACCC CGGCCCGCCT CATGTGCAAG GCGCGTTCAC CATAGGCGAG
AACATCGGCG ACCTGGGCGG GCTGTCGATC GCCCTGCTGG CTTACCAGCT CTCGCTGAAC
GGCAACCCCG CTCCGGTTAT CGACGGGCTG ACCGGCATGC AACGGGTGTT CTTCGGCTGG
GCACAAATAT GGCGAACCAA ATCGCGTGCA GCCGAAGCAA TCCGCCGGTT GGCGGTCGAT
CCGCACTCCC CGCCGGAGTT CCGGTGCAAC GGTGTGGTTC GCAACGTGGA CGCTTTTTAT
CAGGCCTTCG ACGTCACCGA GGATGACGCG CTGTTTCTGG ACCCGCAGCG CAGGGTCCGG
ATCTGGAACT AG
 
Protein sequence
MTLAIPSGID LSHIDADARP QDDLFGHVNG RWLAEHEIPA DRATDGAFRS LFDRAETQVR 
DLIIQASQAG AAVGTDAQRI GDLYASFLDE EAVERAGVQP LHDELATIDS AADATELAAA
LGTLQRAGVG GGIGVYVDTD SKDSTRYLVH FTQSGIGLPD ESYYRDEQHA AVLAAYPGHI
ARMFGLVYGG ESRDHAKTAD RIVALETKLA DAHWDVVKRR DADLGYNLRT FAQLQTEGAG
FDWVSWVTAL GSAPDAMTEL VVRQPDYLVT FASLWASVNV EDWKCWARWR LIRARAPWLT
RALVAEDFEF YGRTLTGAQQ LRDRWKRGVS LVENLMGDAV GKLYVQRHFP PDAKSRIDTL
VDNLQEAYRI SISELDWMTP QTRQRALAKL NKFTAKVGYP IKWRDYSKLA IDRDDLYGNV
QRGYAVNHDR ELAKLFGPVD RDEWFMTPQT VNAYYNPGMN EIVFPAAILQ PPFFDPQADE
AANYGGIGAV IGHEIGHGFD DQGAKYDGDG NLVDWWTDDD RTEFAARTKA LIEQYHAYTP
RDLVDHPGPP HVQGAFTIGE NIGDLGGLSI ALLAYQLSLN GNPAPVIDGL TGMQRVFFGW
AQIWRTKSRA AEAIRRLAVD PHSPPEFRCN GVVRNVDAFY QAFDVTEDDA LFLDPQRRVR
IWN