Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10200 |
Symbol | |
ID | 5220863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 234834 |
End bp | 236825 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640604940 |
Product | zinc metalloprotease |
Protein accession | YP_001286145 |
Protein GI | 148821391 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3590] Predicted metalloendopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 249 |
Plasmid unclonability p-value | 0.409138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 215 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACACTTG CCATCCCCTC GGGTATCGAC CTGAGCCACA TCGACGCTGA TGCCCGACCC CAAGACGACC TGTTCGGCCA CGTTAACGGC CGCTGGCTGG CTGAACACGA GATACCAGCG GACCGAGCGA CCGACGGCGC CTTCCGTAGC CTGTTCGACC GCGCCGAGAC ACAAGTGCGA GACCTGATCA TCCAGGCCAG CCAAGCAGGT GCTGCGGTAG GCACCGATGC GCAGCGCATC GGCGACCTCT ACGCCAGCTT CCTCGACGAG GAAGCCGTCG AGCGCGCAGG GGTGCAACCG CTGCACGACG AATTGGCCAC GATTGACAGC GCGGCCGACG CCACCGAATT GGCCGCCGCC CTTGGCACTC TGCAACGTGC CGGCGTGGGC GGCGGCATCG GAGTCTATGT CGATACCGAT TCCAAAGACT CGACCCGTTA CTTGGTGCAT TTCACCCAAT CCGGCATCGG ATTACCCGAC GAGTCCTACT ACCGTGACGA GCAACACGCC GCCGTGCTAG CGGCCTACCC GGGGCACATC GCCCGGATGT TCGGCCTGGT GTACGGGGGC GAGAGCCGTG ACCATGCCAA AACCGCGGAC CGCATCGTCG CGCTGGAGAC CAAACTCGCC GACGCGCATT GGGATGTGGT GAAGCGCCGC GACGCCGACC TTGGCTACAA CCTGCGCACG TTTGCCCAGC TGCAGACCGA AGGGGCGGGT TTCGACTGGG TCAGCTGGGT GACCGCATTG GGGAGCGCTC CGGACGCCAT GACGGAACTG GTTGTGCGCC AACCTGATTA CCTCGTCACC TTTGCCTCGC TGTGGGCGAG CGTTAACGTT GAAGACTGGA AATGCTGGGC GCGTTGGCGT TTGATCCGCG CCCGGGCCCC CTGGCTGACC CGCGCCCTGG TCGCCGAGGA CTTCGAATTC TACGGCCGCA CGCTTACCGG CGCACAGCAG CTTCGGGACC GTTGGAAGCG TGGGGTGTCA CTGGTGGAGA ACCTGATGGG CGATGCCGTC GGAAAGCTCT ATGTACAACG CCATTTCCCG CCGGATGCCA AGTCCCGCAT CGACACCCTG GTGGACAACC TGCAGGAGGC GTATCGGATC AGCATCAGCG AGCTGGATTG GATGACGCCG CAGACCCGGC AACGCGCGCT AGCGAAGCTG AACAAGTTCA CCGCCAAAGT CGGCTATCCG ATCAAGTGGC GCGACTACTC GAAGCTGGCG ATCGACCGCG ACGACCTCTA CGGTAACGTC CAGCGCGGCT ACGCCGTCAA CCATGACCGC GAGCTAGCCA AGCTTTTCGG CCCGGTCGAC CGCGACGAGT GGTTCATGAC ACCACAAACC GTCAACGCCT ACTACAACCC GGGGATGAAC GAAATCGTCT TCCCCGCAGC GATTTTACAG CCACCATTTT TCGATCCGCA GGCCGACGAG GCCGCCAACT ACGGCGGGAT CGGGGCGGTG ATCGGGCACG AGATCGGGCA CGGTTTCGAC GATCAGGGCG CCAAATACGA CGGCGACGGC AATCTGGTCG ATTGGTGGAC CGACGACGAT CGCACCGAGT TCGCCGCCCG CACCAAAGCG TTGATCGAGC AGTACCACGC TTACACGCCG CGCGATCTCG TCGACCACCC CGGCCCGCCT CATGTGCAAG GCGCGTTCAC CATAGGCGAG AACATCGGCG ACCTGGGCGG GCTGTCGATC GCCCTGCTGG CTTACCAGCT CTCGCTGAAC GGCAACCCCG CTCCGGTTAT CGACGGGCTG ACCGGCATGC AACGGGTGTT CTTCGGCTGG GCACAAATAT GGCGAACCAA ATCGCGTGCA GCCGAAGCAA TCCGCCGGTT GGCGGTCGAT CCGCACTCCC CGCCGGAGTT CCGGTGCAAC GGTGTGGTTC GCAACGTGGA CGCTTTTTAT CAGGCCTTCG ACGTCACCGA GGATGACGCG CTGTTTCTGG ACCCGCAGCG CAGGGTCCGG ATCTGGAACT AG
|
Protein sequence | MTLAIPSGID LSHIDADARP QDDLFGHVNG RWLAEHEIPA DRATDGAFRS LFDRAETQVR DLIIQASQAG AAVGTDAQRI GDLYASFLDE EAVERAGVQP LHDELATIDS AADATELAAA LGTLQRAGVG GGIGVYVDTD SKDSTRYLVH FTQSGIGLPD ESYYRDEQHA AVLAAYPGHI ARMFGLVYGG ESRDHAKTAD RIVALETKLA DAHWDVVKRR DADLGYNLRT FAQLQTEGAG FDWVSWVTAL GSAPDAMTEL VVRQPDYLVT FASLWASVNV EDWKCWARWR LIRARAPWLT RALVAEDFEF YGRTLTGAQQ LRDRWKRGVS LVENLMGDAV GKLYVQRHFP PDAKSRIDTL VDNLQEAYRI SISELDWMTP QTRQRALAKL NKFTAKVGYP IKWRDYSKLA IDRDDLYGNV QRGYAVNHDR ELAKLFGPVD RDEWFMTPQT VNAYYNPGMN EIVFPAAILQ PPFFDPQADE AANYGGIGAV IGHEIGHGFD DQGAKYDGDG NLVDWWTDDD RTEFAARTKA LIEQYHAYTP RDLVDHPGPP HVQGAFTIGE NIGDLGGLSI ALLAYQLSLN GNPAPVIDGL TGMQRVFFGW AQIWRTKSRA AEAIRRLAVD PHSPPEFRCN GVVRNVDAFY QAFDVTEDDA LFLDPQRRVR IWN
|
| |