Gene PsycPRwf_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2361 
Symbol 
ID5206453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2942659 
End bp2944227 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content46% 
IMG OID640600624 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001281251 
Protein GI148654158 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATT CTGCCATTTT TACAGACCAA GCCAGTCTTC CCCCATCTAC TGAGCGTCCG 
GATTTTTCTC CTAGCAATCC TTATGCCAAA AAACAGTTTG ATGCAGCGAC CTCTGAGATG
CCGCAGTTAG AATATGATCA GGCGTTAATT CATAAATATA ATCGTTCAGG GCCACGCTAT
ACCTCATACC CTACTGCGCT TGAGTTTAAG CCCATTGAAG CCGGCGTTGA ATTAGAGGTT
TTGACCCGCC GCGACCCCAA TGCGCCCCTA TCGCTTTATT TTCACATTCC CTTTTGTCGC
CATCTTTGCT ACTACTGTGC TTGCAATAAG ATCATCACCA AAAAGAACAG CGATGCCGGT
GACTACCTAG CGTATCTAAA AAATGAAGTA AAACAAAAGC GTGCCTTATT ACAACGTCCT
GACTCAGGTG GTAAGCCTTA TGTCAAGCAG CTGCATTTGG GTGGGGGTAC ACCGACTTTC
TTTAGTGATG AGGAACTGAC TGAGCTTTGG CAGTTTTTGC AGACCCAGTT TGAATTTGCG
CCCACCTCAG TTGAGCAAGT GAGCGATGAG CACCCAGAAA TGGGAGACTA TTCTGTAGAG
ATTGACCCTC GAGAGATTAG AGATACCACG TTGAGCGTGT TACGCAGTTT GGGCTTTAAC
CGAGTCAGCT TCGGGGTGCA GGACTTGGAT GACAAGGTTC AGATTGCGGT GAACCGAGTG
CAATCTGAAG CGCTTATCCG TAGTGTGATG CAAGAGACCC GCCGCTTAGG CTTTCAGTCG
ACCAATATTG ACTTAATCTA TGGGCTGCCG CATCAAACGC CGCAGACGTT CGCTAAGACG
GTACAGACCA TTATTGACAT CTCGCCTGAT AGATTGTCCA TCTTTAACTA TGCGCACCTG
CCCGATCGCT TTAAGTCGCA GCGTCAGATT AAAGAGGAGG ATTTACCGAC ACCAGCCGAG
AAGCTTGAGA TGTTCAGTGA TACCATAGCC GCGTTGAATA CAGCTGGCTA CCAGTACATC
GGTATCGATC ACTTTGCGAA GCCTGATGAC AGCATGGCCA TCGCTCAGCG TGATGGTATT
TTGCACCGCA ACTTCCAAGG CTATACCATC TTAGGTGACT GCGACTTATT GGGCTTTGGT
GTCTCCTCTA TCAGTCAAAT TAACAGCACC TTGTATGCCA ATAAGGGCAA TACCTCTACT
CATATTCTAC AAAACCACAC AGATTTAAAA GAGTATGAGG CCATGGTAGA TGCTGGCAAA
CTACCGGCGG TACGCCATAT CAAAACCAGC ATACAAGACC GTCTGCGTGG TTATGTGATT
TCCAATCTGT TGTGCCATGA TTACATTGAT TTTAAGGACT TAAATCAAAA ATTTGGGATA
GATGCCATCA CATTTTTTAT TGATGAAATT CAGCAGCTCG GTGAGATGCA GCAAGACCGA
CTTATAGATA TGGATGCTGC CGGTATCCGT ATTTTGCCAA AGGGACGCCT GCTTGCCCGC
AACGTGGCCA TGGTATTTGA TAGCTATTTG GCAAGTAAAG AAAAAAACCG CTTCTCTAAA
GTGATTTAG
 
Protein sequence
MTHSAIFTDQ ASLPPSTERP DFSPSNPYAK KQFDAATSEM PQLEYDQALI HKYNRSGPRY 
TSYPTALEFK PIEAGVELEV LTRRDPNAPL SLYFHIPFCR HLCYYCACNK IITKKNSDAG
DYLAYLKNEV KQKRALLQRP DSGGKPYVKQ LHLGGGTPTF FSDEELTELW QFLQTQFEFA
PTSVEQVSDE HPEMGDYSVE IDPREIRDTT LSVLRSLGFN RVSFGVQDLD DKVQIAVNRV
QSEALIRSVM QETRRLGFQS TNIDLIYGLP HQTPQTFAKT VQTIIDISPD RLSIFNYAHL
PDRFKSQRQI KEEDLPTPAE KLEMFSDTIA ALNTAGYQYI GIDHFAKPDD SMAIAQRDGI
LHRNFQGYTI LGDCDLLGFG VSSISQINST LYANKGNTST HILQNHTDLK EYEAMVDAGK
LPAVRHIKTS IQDRLRGYVI SNLLCHDYID FKDLNQKFGI DAITFFIDEI QQLGEMQQDR
LIDMDAAGIR ILPKGRLLAR NVAMVFDSYL ASKEKNRFSK VI