Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2361 |
Symbol | |
ID | 5206453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2942659 |
End bp | 2944227 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600624 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001281251 |
Protein GI | 148654158 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATT CTGCCATTTT TACAGACCAA GCCAGTCTTC CCCCATCTAC TGAGCGTCCG GATTTTTCTC CTAGCAATCC TTATGCCAAA AAACAGTTTG ATGCAGCGAC CTCTGAGATG CCGCAGTTAG AATATGATCA GGCGTTAATT CATAAATATA ATCGTTCAGG GCCACGCTAT ACCTCATACC CTACTGCGCT TGAGTTTAAG CCCATTGAAG CCGGCGTTGA ATTAGAGGTT TTGACCCGCC GCGACCCCAA TGCGCCCCTA TCGCTTTATT TTCACATTCC CTTTTGTCGC CATCTTTGCT ACTACTGTGC TTGCAATAAG ATCATCACCA AAAAGAACAG CGATGCCGGT GACTACCTAG CGTATCTAAA AAATGAAGTA AAACAAAAGC GTGCCTTATT ACAACGTCCT GACTCAGGTG GTAAGCCTTA TGTCAAGCAG CTGCATTTGG GTGGGGGTAC ACCGACTTTC TTTAGTGATG AGGAACTGAC TGAGCTTTGG CAGTTTTTGC AGACCCAGTT TGAATTTGCG CCCACCTCAG TTGAGCAAGT GAGCGATGAG CACCCAGAAA TGGGAGACTA TTCTGTAGAG ATTGACCCTC GAGAGATTAG AGATACCACG TTGAGCGTGT TACGCAGTTT GGGCTTTAAC CGAGTCAGCT TCGGGGTGCA GGACTTGGAT GACAAGGTTC AGATTGCGGT GAACCGAGTG CAATCTGAAG CGCTTATCCG TAGTGTGATG CAAGAGACCC GCCGCTTAGG CTTTCAGTCG ACCAATATTG ACTTAATCTA TGGGCTGCCG CATCAAACGC CGCAGACGTT CGCTAAGACG GTACAGACCA TTATTGACAT CTCGCCTGAT AGATTGTCCA TCTTTAACTA TGCGCACCTG CCCGATCGCT TTAAGTCGCA GCGTCAGATT AAAGAGGAGG ATTTACCGAC ACCAGCCGAG AAGCTTGAGA TGTTCAGTGA TACCATAGCC GCGTTGAATA CAGCTGGCTA CCAGTACATC GGTATCGATC ACTTTGCGAA GCCTGATGAC AGCATGGCCA TCGCTCAGCG TGATGGTATT TTGCACCGCA ACTTCCAAGG CTATACCATC TTAGGTGACT GCGACTTATT GGGCTTTGGT GTCTCCTCTA TCAGTCAAAT TAACAGCACC TTGTATGCCA ATAAGGGCAA TACCTCTACT CATATTCTAC AAAACCACAC AGATTTAAAA GAGTATGAGG CCATGGTAGA TGCTGGCAAA CTACCGGCGG TACGCCATAT CAAAACCAGC ATACAAGACC GTCTGCGTGG TTATGTGATT TCCAATCTGT TGTGCCATGA TTACATTGAT TTTAAGGACT TAAATCAAAA ATTTGGGATA GATGCCATCA CATTTTTTAT TGATGAAATT CAGCAGCTCG GTGAGATGCA GCAAGACCGA CTTATAGATA TGGATGCTGC CGGTATCCGT ATTTTGCCAA AGGGACGCCT GCTTGCCCGC AACGTGGCCA TGGTATTTGA TAGCTATTTG GCAAGTAAAG AAAAAAACCG CTTCTCTAAA GTGATTTAG
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Protein sequence | MTHSAIFTDQ ASLPPSTERP DFSPSNPYAK KQFDAATSEM PQLEYDQALI HKYNRSGPRY TSYPTALEFK PIEAGVELEV LTRRDPNAPL SLYFHIPFCR HLCYYCACNK IITKKNSDAG DYLAYLKNEV KQKRALLQRP DSGGKPYVKQ LHLGGGTPTF FSDEELTELW QFLQTQFEFA PTSVEQVSDE HPEMGDYSVE IDPREIRDTT LSVLRSLGFN RVSFGVQDLD DKVQIAVNRV QSEALIRSVM QETRRLGFQS TNIDLIYGLP HQTPQTFAKT VQTIIDISPD RLSIFNYAHL PDRFKSQRQI KEEDLPTPAE KLEMFSDTIA ALNTAGYQYI GIDHFAKPDD SMAIAQRDGI LHRNFQGYTI LGDCDLLGFG VSSISQINST LYANKGNTST HILQNHTDLK EYEAMVDAGK LPAVRHIKTS IQDRLRGYVI SNLLCHDYID FKDLNQKFGI DAITFFIDEI QQLGEMQQDR LIDMDAAGIR ILPKGRLLAR NVAMVFDSYL ASKEKNRFSK VI
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