Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2338 |
Symbol | |
ID | 5206288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2908853 |
End bp | 2911096 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640600601 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_001281228 |
Protein GI | 148654135 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0761129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCC CCTCAAACAC TCATACGCCC GCCTCGCACA CACCGGTGAA CCAAAGACAA ACCGCTGTCG ATTTGCCTGT TCAGGTGTTG GCTGGTGTGG GCAGTAAAAT TGAGGGTCAG CTTGAGCAGC TGGGTGTGTC ACGCTTGTTT GATTTGCTAC TGCATCTGCC GCGTGATTAT GAAGACCGCA GCCGTTTGGT CAATATCAGC GACTTACAAG ACGGGCAGTC GGCGCTTATA GAAGGGCAAG TCACTTATGT GGATAACAAA CGTGGCGGTA TGACGGTGGT CATTGAAGAT GCCACTGGCG CCATTCAGCT ACGCTTTTTT AAGGTCTATG CAAGCTTGGT ACAGACCATG ACGCTCGGCA CACGGCTCAG GCTGTTTGGT GAAGTCAAAA TCAGCCGCTA CGGCATGCAG ATGGCCCACC CTGAATACAA TATGGTGACG GCCGGTGCGC CTGTGGTAAA CACCGGCCTA CAGCCCATTT ATCCTGCGGT TAAGGGGCTG CATCAAAACA AACTACGTAC CTTGGTCAAA CTGGCACTAC AGACCGTTCA TCAGCAAGGA CTGCCTTTAA CAGTGTTTGA TGAGGCCGAC TGGCAAGCCG TTAATCACTT GCCAGCACCG CTACCGACCA ATAGCTATGG CCTGCCCAGC TCGGCAGCAT CTCAGCAAAC CAGCCCATCA CCCAACAGCG CCCCAAGTTG GCAGCATTTA ACGTTGTTTG AGGCATTGAC TTTAATTCAC ACCCCGCCGA TGCATACTGA TATCACGTTG CAAGCGGCGC AGCTTGAGCA GTTAAAAGCG CGCACTCACC CTGCCTGCCA GCGGCTGATT GTTGAGGAGC TAACCGCACA TCAATTAAGC ATGCTGTATC GCCGTAAGCA GCTGCATCAA CACAAAGCGC CTAAATGTGA CGGTGATAGC CCGCTGGCTG AGAAGCTGCT GGCCAACCTG CCCTTTAGCT TAACCGGTGC GCAAGATCGA GTGATTAAAG AGATTACCAG TGACATGGCG ACCTCTATTC CGATGCTACG ACTGGTACAA GGCGATGTCG GTGCTGGTAA AACCTTGGTC GCAGCATTGG CAGCCTGTTA TGCCCTCGAT AGCGGCTGGC AGGTGGCGGT CATGGCGCCC ACTGAGATTT TAGCCGAGCA GCATCTGATT AACTTTAAGG CTTGGTTTGA GCCATTAGGT ATCGGTGTCG GCTGGCTAGC TGGCAAGCAA ACCGCCAAGC AGCGCCGTGA AGCACTGGCC GATGTCGCCG AGAATGAGGT TCAGATTGTG GTCGGTACCC ATGCGTTATT TCAAGATGCG GTGGTGTTTG CCAAATTGGG ACTGGCAATT ATTGATGAGC AGCACCGCTT TGGGGTTGAG CAGCGTATGG CATTGACCAA CAAAGGCGTG GCCAATAGCA CCCCGCATCA GCTGATTATG ACAGCCACTC CGATTCCACG TACGCTGGCC ATGAGTGCCT ATGGCGATAT GGATACCTCC ATTATTGATG AGCTGCCGCC GGGGCGAACC CCGATTACCA CAGTTACCAT TGACCGTGCC CGCCGTGATG AGGTGATTGA GCGCATCGCC GCTAACTGTA AAGAGGGCAA GCAAGCGTAC TGGGTCTGCC CACTGGTTGA TGATTCAAGC ACCTTAAATG CGCAAGCGGC TGAAGCCACT TTTGCCGATT TAAGCGAGCG TTTGGATATT CGTATCGGCA TGGTACACGG CAAGATGAAG TCAAAAGAAA AGCAAGAGAT TATGGCTGCA TTTAAGAACG CCGAGCTTGA TCTATTGGTC GCAACAACCG TCATTGAGGT CGGCGTCGAT GTGCCTAACG CCTCACTGAT GGTGATAGAA AATGCCGAGC GTTTGGGATT ATCACAGCTG CATCAGCTGC GTGGCCGTGT TGGGCGTGGC TCGACCAAAA GCTTCTGTGT GCTGCTATAC CAAACCCCAT TATCAGAAAC TGGCATCGAG CGTCTCAATG TACTGCGTGA CAGCAATGAT GGCTTTGTGA TTGCTCAAAA AGACTTGCAA CTGCGTGGCC CAGGCGAGCT ACTTGGCAAG CGTCAAACCG GTAATATTGG CTATTATGTG TCCGATTTGA CCCGTGATGA AAACCTATTG ATGATCGCCA GTCATTTGGC CAAACGCCTG ATTAATGATG ACGCACGCAA AACAGAAGTC ACCCAGCTGA TCCACCGCTG GATGCCTGAG GCGAGCAAAT ATACCAATGT GTAG
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Protein sequence | MPIPSNTHTP ASHTPVNQRQ TAVDLPVQVL AGVGSKIEGQ LEQLGVSRLF DLLLHLPRDY EDRSRLVNIS DLQDGQSALI EGQVTYVDNK RGGMTVVIED ATGAIQLRFF KVYASLVQTM TLGTRLRLFG EVKISRYGMQ MAHPEYNMVT AGAPVVNTGL QPIYPAVKGL HQNKLRTLVK LALQTVHQQG LPLTVFDEAD WQAVNHLPAP LPTNSYGLPS SAASQQTSPS PNSAPSWQHL TLFEALTLIH TPPMHTDITL QAAQLEQLKA RTHPACQRLI VEELTAHQLS MLYRRKQLHQ HKAPKCDGDS PLAEKLLANL PFSLTGAQDR VIKEITSDMA TSIPMLRLVQ GDVGAGKTLV AALAACYALD SGWQVAVMAP TEILAEQHLI NFKAWFEPLG IGVGWLAGKQ TAKQRREALA DVAENEVQIV VGTHALFQDA VVFAKLGLAI IDEQHRFGVE QRMALTNKGV ANSTPHQLIM TATPIPRTLA MSAYGDMDTS IIDELPPGRT PITTVTIDRA RRDEVIERIA ANCKEGKQAY WVCPLVDDSS TLNAQAAEAT FADLSERLDI RIGMVHGKMK SKEKQEIMAA FKNAELDLLV ATTVIEVGVD VPNASLMVIE NAERLGLSQL HQLRGRVGRG STKSFCVLLY QTPLSETGIE RLNVLRDSND GFVIAQKDLQ LRGPGELLGK RQTGNIGYYV SDLTRDENLL MIASHLAKRL INDDARKTEV TQLIHRWMPE ASKYTNV
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