Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2322 |
Symbol | |
ID | 5206538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2888931 |
End bp | 2889764 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640600585 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_001281212 |
Protein GI | 148654119 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0472235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.432389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTAT TTAAAAACAA AAAAAGCCGC TTTGACACCC CAGCTTCGCT GCTAGACGGT GAAAAAGTGA GCGATAGCAT AGAAGACAGT AACAGCTTGG CTGATATGCC CCTAACTGAG CACTTAGTTG AGCTTAGAAT GCACCTTATA AAAATCATGG TGGTGGTGGC AGTTATTTTC CTAGCTTTGG TGGGGTTCTC TCGTGAGCTG TATGACTTTA TCTCAGAGCC ACTTGTTGAG ATACTGCCCC ATACCTCAAC CATGATTGCC ATTGATCCGG TGGCCAACTT CATGGCTCCG ATCCGCTTAA CTTTATTGAC TTCGGCATTT TTTGCCATGC CGTTTATCTT ATACCAGATT TGGTCATTTG TAGCGCCTGG ACTTTATAAG CACGAAAAGC GGATTGCTGT GCCTATTTTA TTGTCCTCTA TTGTGCTGTT TTATACGGGC GTGGCTTTCG CTTACTTTAT CGTATTACGC CGGGCACTGA GTTTTTTGAT TACTTTCTCG CCCTCAAGCG TGGTGCCAAT GACCGATATC GAAAGCTACT TAAGCTTTGT CACTAAGCTA CTAATGATGT TTGGCATTAC TTTTGAGATA CCGGTGGTGG TGCTTATTTT AGTATTGACC GGTATTGTGT CGGTGGCATC ATTAGCGGAC AAACGTCGTT ATGTGATTGT GGCTTGCTTT GCTGCCGCTG GGGTGATGTC ACCGCCGGAT GTGCCCTCTA TGTTTTTATT GGCCATTCCA ATGATTTTAT TGTTTGAATT TGGCTTATTA ATGGCCAGAT TACTGGTAAA AGAGAAACAG GCGGCGCTTA AAGAGGGTGA ATAA
|
Protein sequence | MSLFKNKKSR FDTPASLLDG EKVSDSIEDS NSLADMPLTE HLVELRMHLI KIMVVVAVIF LALVGFSREL YDFISEPLVE ILPHTSTMIA IDPVANFMAP IRLTLLTSAF FAMPFILYQI WSFVAPGLYK HEKRIAVPIL LSSIVLFYTG VAFAYFIVLR RALSFLITFS PSSVVPMTDI ESYLSFVTKL LMMFGITFEI PVVVLILVLT GIVSVASLAD KRRYVIVACF AAAGVMSPPD VPSMFLLAIP MILLFEFGLL MARLLVKEKQ AALKEGE
|
| |