Gene PsycPRwf_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2322 
Symbol 
ID5206538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2888931 
End bp2889764 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content44% 
IMG OID640600585 
ProductSec-independent protein translocase, TatC subunit 
Protein accessionYP_001281212 
Protein GI148654119 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0472235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.432389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAT TTAAAAACAA AAAAAGCCGC TTTGACACCC CAGCTTCGCT GCTAGACGGT 
GAAAAAGTGA GCGATAGCAT AGAAGACAGT AACAGCTTGG CTGATATGCC CCTAACTGAG
CACTTAGTTG AGCTTAGAAT GCACCTTATA AAAATCATGG TGGTGGTGGC AGTTATTTTC
CTAGCTTTGG TGGGGTTCTC TCGTGAGCTG TATGACTTTA TCTCAGAGCC ACTTGTTGAG
ATACTGCCCC ATACCTCAAC CATGATTGCC ATTGATCCGG TGGCCAACTT CATGGCTCCG
ATCCGCTTAA CTTTATTGAC TTCGGCATTT TTTGCCATGC CGTTTATCTT ATACCAGATT
TGGTCATTTG TAGCGCCTGG ACTTTATAAG CACGAAAAGC GGATTGCTGT GCCTATTTTA
TTGTCCTCTA TTGTGCTGTT TTATACGGGC GTGGCTTTCG CTTACTTTAT CGTATTACGC
CGGGCACTGA GTTTTTTGAT TACTTTCTCG CCCTCAAGCG TGGTGCCAAT GACCGATATC
GAAAGCTACT TAAGCTTTGT CACTAAGCTA CTAATGATGT TTGGCATTAC TTTTGAGATA
CCGGTGGTGG TGCTTATTTT AGTATTGACC GGTATTGTGT CGGTGGCATC ATTAGCGGAC
AAACGTCGTT ATGTGATTGT GGCTTGCTTT GCTGCCGCTG GGGTGATGTC ACCGCCGGAT
GTGCCCTCTA TGTTTTTATT GGCCATTCCA ATGATTTTAT TGTTTGAATT TGGCTTATTA
ATGGCCAGAT TACTGGTAAA AGAGAAACAG GCGGCGCTTA AAGAGGGTGA ATAA
 
Protein sequence
MSLFKNKKSR FDTPASLLDG EKVSDSIEDS NSLADMPLTE HLVELRMHLI KIMVVVAVIF 
LALVGFSREL YDFISEPLVE ILPHTSTMIA IDPVANFMAP IRLTLLTSAF FAMPFILYQI
WSFVAPGLYK HEKRIAVPIL LSSIVLFYTG VAFAYFIVLR RALSFLITFS PSSVVPMTDI
ESYLSFVTKL LMMFGITFEI PVVVLILVLT GIVSVASLAD KRRYVIVACF AAAGVMSPPD
VPSMFLLAIP MILLFEFGLL MARLLVKEKQ AALKEGE