Gene PsycPRwf_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2314 
Symbol 
ID5206530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2881401 
End bp2881721 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content40% 
IMG OID640600577 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001281204 
Protein GI148654111 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000800126 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.266059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA AAAACTCAGA GACACAAACA TTAACCAAAG CAGATATTAT CGATCATTTG 
GTGGTTAAGT TTGGTTTTAC CAGGCAACAA GGCCGCATGC TGGTAGATTC ATTTTTTGAT
GAAATCTATG ATAATTTAGT AGGTGGTAAG GATGTTAAGC TATCAGGCTT TGGTAATTTT
ATTCTAAAAG ATAAAAAAAG CCGGCCAGGA CGCAATCCTA AGACGGGGGA GGAGGTAGAG
ATATCAGCTC GCCGTGTCGT CACTTTCAAA GCAGGTCAAA AATTACGCCG CCAAGTAGAT
GAAAGTCAGC TACAGGCATA A
 
Protein sequence
MKAKNSETQT LTKADIIDHL VVKFGFTRQQ GRMLVDSFFD EIYDNLVGGK DVKLSGFGNF 
ILKDKKSRPG RNPKTGEEVE ISARRVVTFK AGQKLRRQVD ESQLQA