| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2310 |
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| Symbol | rho |
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| ID | 5206131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2877323 |
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| End bp | 2878621 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600573 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001281200 |
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| Protein GI | 148654107 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000407022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.229849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAC AACCATCGAA CGAAACCTCT ATGAACCTGA CTGAACTAAA AAAGAACTCC
GTTGCTGAAT TGCTAAATAT AGCAAAAGAA ATGGGGCTCG ATAATTTGGC ACGTAGCCGC
AAACAAGACA TCATCTTTGC TATTTTAAAA AAGCACGCCA AAAATGGTGA AGCCATTTAC
GGCGACGGGG TACTTGAAGT GCTTCCTGAT GGATTTGGCT TCCTAAGATC TTCAGAAGGC
TCTTATTTGG CTGGACCTGA TGACATCTAT GTAAGCCCAA GCCAAATCCG CCGCTTTAGC
CTAAAAACAG GCGACTCTAT TGCCGGCACC ATCCGTCCAC CAAAAGATTC AGAACGTTAC
TTTGCCTTAC TTAAAGTGGG TGAAATCAAC TTCGATACCC CAGATCGCTC ACGTCACAAA
TTAATCTTCG AGAACTTAAC CCCACTATTC CCCACCGAGC AATTAAAGCT TGAGATGGGC
AATGGTACAA CCGAAGACTT AACCGGACGT GTCATTGACT TAATCGCCCC TATTGGTAAA
GGCCAGCGCT CCATTATCGT GGCGCCGCCC AAAGCCGGTA AAACCGTTCT ACTACAAACC
ATCGCTCAAT CTATTACCCG CAATAACCCT GAATGCTATC TGATTGTACT ACTTATCGAT
GAGCGCCCAG AGGAAGTGAC CGAAATGCAG CGTACTGTGC GCGGTGAAGT GGTTGCATCA
ACCTTTGATG AACCGCCACA GCGTCACGTT CAAGTGGCTG AAATGGTCAT CGAAAAAGCC
AAGCGCTTGG TAGAACATAA GCAAGATGTG GTGATTTTAT TAGATTCAAT TACCCGATTG
GCTCGTGCCT ATAACACTGT GGTGCCCTCA TCAGGTAAAG TGTTGACTGG TGGTGTGGAT
GCCAATGCTC TAGCCCAGCC CAAGCGCTTC TTTGGTGCGG CACGTAATAT CGAGGAAGGG
GGCAGCTTAA CCATCATTTC AACTGCGCTG ATTGATACGG GCAGTAAAAT GGACAGCGTT
ATCTTTGAAG AATTCAAAGG TACTGGTAAC CAAGAGATTA CCCTTGAGCG TGACTTAGCC
GAAAAACGAG TATTCCCAGC CATTAATATC AAAAAATCAG GCACCCGCCG TGAGGAGCGC
TTGCTTGACG AAGATACGCT GCGTAAAGTT TGGATTTTGC GTAAACTGCT ACAGCCTATG
GATGGCGTAC AAGCCACTGA GTTCTTATTA GATCGCTTAA AAGAAGCCAA GACCAATGAC
GACTTTTTCG ATCAAATGAA GCGCAAATCA CAAAACTAA
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| Protein sequence | MTQQPSNETS MNLTELKKNS VAELLNIAKE MGLDNLARSR KQDIIFAILK KHAKNGEAIY
GDGVLEVLPD GFGFLRSSEG SYLAGPDDIY VSPSQIRRFS LKTGDSIAGT IRPPKDSERY
FALLKVGEIN FDTPDRSRHK LIFENLTPLF PTEQLKLEMG NGTTEDLTGR VIDLIAPIGK
GQRSIIVAPP KAGKTVLLQT IAQSITRNNP ECYLIVLLID ERPEEVTEMQ RTVRGEVVAS
TFDEPPQRHV QVAEMVIEKA KRLVEHKQDV VILLDSITRL ARAYNTVVPS SGKVLTGGVD
ANALAQPKRF FGAARNIEEG GSLTIISTAL IDTGSKMDSV IFEEFKGTGN QEITLERDLA
EKRVFPAINI KKSGTRREER LLDEDTLRKV WILRKLLQPM DGVQATEFLL DRLKEAKTND
DFFDQMKRKS QN
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