Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2305 |
Symbol | |
ID | 5206126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2872444 |
End bp | 2873055 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640600568 |
Product | oxidoreductase related to nitroreductase-like protein |
Protein accession | YP_001281195 |
Protein GI | 148654102 |
COG category | [R] General function prediction only |
COG ID | [COG3560] Predicted oxidoreductase related to nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000723605 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0201915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAATC TACAAGCATT TCAAACACTA GCAGAAGCAC GTCGTTCTAT CTACGCTATC AACGATCAAC TACCAGTATC TAAAGAAGAG ATCGTTAAGT TGGTTGAGCA CGCTGTATTG CACACGCCAT CAGCTTTTAA TTCTCAGTCA AGCCGTCTGG TTGTACTATT TGGTGAAGAC CACAAAAAAT TATGGCAAAT CACTGAAGAC AAGCTACGCG CTATCGTAAA TGACGATACT GCTTTTGAAA GCACCAAACA GAAAATTGAC AGCTTCAAAG CGGGCGCTGG TACAGTATTG TTCTATGAAG ATCAAACTGT TGTTAAAGGT TTACAAGAAA ACTTCGCACT ATACGCAGAC CGCTTCCCAG TATGGTCAGA GCATGCTAGC GCTATGCATC AGTACGTAGT TTGGACTGCT CTAGCTAGCC AAAACATTGG CGCAAGCTTA CAGCACTACA ACCCAATCAT TGACGAAGAA GTTGACAGCA CTTGGAATAT CGACCCTGAG TGGGACCTTG TTGCTCAATT AGTATTCGGT GGTATCGAGC AGCCTGCAGG CGAAAAACAA TTCGCTCCTG TTGACAGCCG CCTAAAAGTA TTCGGTCTAT AA
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Protein sequence | MSNLQAFQTL AEARRSIYAI NDQLPVSKEE IVKLVEHAVL HTPSAFNSQS SRLVVLFGED HKKLWQITED KLRAIVNDDT AFESTKQKID SFKAGAGTVL FYEDQTVVKG LQENFALYAD RFPVWSEHAS AMHQYVVWTA LASQNIGASL QHYNPIIDEE VDSTWNIDPE WDLVAQLVFG GIEQPAGEKQ FAPVDSRLKV FGL
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