Gene PsycPRwf_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2304 
Symbol 
ID5206125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2871242 
End bp2872174 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID640600567 
Productpirin domain-containing protein 
Protein accessionYP_001281194 
Protein GI148654101 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000453876 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0236921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG AAATTCTTGA ACCCCGTATC GCTGATGTCG GTGGTATTCC CATTGCTCGT 
TTATTACCAA ATAAAGGCAA GCGTCCTATT GGTGCTTGGT GCTTCATGGA TCATGCTGGT
CCTGCCGAAT TTGGTGACGA TGAAGAGGGT ATGCAAGTGG GTCGCCATCC ACACATCAAC
CTACAAACTT TCAGCTGGAT GATTGAAGGT GAAGTCCTAC ACAAAGACAG CATCGGCAAT
GAACAATTGA TTACCAAAAA CCAAGTCAAC GTGATGACGG CGGGTACTGG TAACGATCAG
GGTATCAGTC ACACTGAGCA AAGCGTATTC CCAGAAACGG GCGGCTCTGC TGATGCTTGG
CGTGGTATGA ACATGGTTCA GCTGTGGATT GCGCTACCGC TTGATCAAAA AATTGAACGT
AACTTCCATC ACTACCCAGA GCTACCAAGC TGGTCTACTG ATACTGCTGA CTTTGTACTA
ACCACCGGTA GCTACACCAC GCCACAAGGT GACAGCTACG AAGCACCGAC CATCCAGTAC
ACCAAACTTA TTGGTCTAGA TGTGCACATG ACTCAAGACG ATGACGTTGA GCTGACCTTA
GAGCCTGGTT TTGAATACGG TATTTTAATG GTCGTAGATG GTATCGAGTA TCAAGGCCAG
CAGTACAAAC AAAACGAATT AATCCGTTTT GATGACATCT CTGAGACAAC AACCATTAAA
GTTTCAGGTA AAAAAGGCGC TCGCTTTATG TTGTTAGGCG GTGAGCCATT GAATCAAAAA
GTGCTACTGT GGTGGAACTT CGTTGCTGAT AACAAAGCAG ATATTGAACT GGCCATTAAT
GATTGGAATA ATAATCACCC ACGTTTTGGT AACGTAGACT CTGATCTAAA ACGATTAGAA
GCCCCTGCTT TACCTGAAGG TTTTAAAGAA TAA
 
Protein sequence
MKTEILEPRI ADVGGIPIAR LLPNKGKRPI GAWCFMDHAG PAEFGDDEEG MQVGRHPHIN 
LQTFSWMIEG EVLHKDSIGN EQLITKNQVN VMTAGTGNDQ GISHTEQSVF PETGGSADAW
RGMNMVQLWI ALPLDQKIER NFHHYPELPS WSTDTADFVL TTGSYTTPQG DSYEAPTIQY
TKLIGLDVHM TQDDDVELTL EPGFEYGILM VVDGIEYQGQ QYKQNELIRF DDISETTTIK
VSGKKGARFM LLGGEPLNQK VLLWWNFVAD NKADIELAIN DWNNNHPRFG NVDSDLKRLE
APALPEGFKE