Gene PsycPRwf_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2279 
Symbol 
ID5205573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2843426 
End bp2844247 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID640600541 
Producthypothetical protein 
Protein accessionYP_001281169 
Protein GI148654076 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.705159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.384237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATTAA TCATCTTTTT AATCATTGGC GCTCTGGCAG GATTTGCAGC AGGGCTATTT 
GGCGTGGGCG GTGGTACCAT CATCGTACCG CTGTTGTTTA TTGTGTTTAC TCAAATGGGC
TATGACCCAG ATACCATCAT GCATCTAGCA TTAGGCACCT CACTGGCGAC CATTATTGTC
ACCTCGATAA GCTCACTTAT GGCGCACAAT AAAAAGGGCT CTGTGATGTG GCCGGTGTTC
AAAAACCTAG CTCCTGGCAT GGCATTAGGC TGCTTCTTTG GTGCAGGATT GGCCGGCCAG
ATATCGGGAC TACACCTACA GATTATTGTT GGTATCTTCT TGCTGTGGGT TGCCTATAGG
ATGTTCTTCG GTGGCAAAAA GGCAGCGGCC AGCACGACTG ATGACAATAC TGCGCCGGCC
ATACTGCCGT CAAAACCTAG ACAGCTAGCA GCAGGAGGGG TGATTGGTAT TGCTTCTGCC
ATCTTCGGTA TTGGTGGTGG TAGCTTAACT GTGCCTTATT TGACCCGTTA TGGCGTGGTT
ATGCAAAAAG CGGTCGGTAC TTCTGCAGCT TGCGGCTTAC CTATTGCCAT CGCCGGCGCA
TTGGGCTTTA TGTTATTTGG CATGCAGCAA AAAATAGATG TCCCTAATAC CATTGGTTTC
GTACACATTT ATGCTTTTTT GGGCATCAGT GTCATGAGCT TTTTTACCGC CAAACTGGGC
GCAAAAGTGG CGCATATTTT ATCACCTGCC ATGCTAAAAA AGTGCTTTGC CATATTGCTT
ACGGTTGTGG GCTGTTATTT TCTCTACAAA GGACTACGTT AA
 
Protein sequence
MELIIFLIIG ALAGFAAGLF GVGGGTIIVP LLFIVFTQMG YDPDTIMHLA LGTSLATIIV 
TSISSLMAHN KKGSVMWPVF KNLAPGMALG CFFGAGLAGQ ISGLHLQIIV GIFLLWVAYR
MFFGGKKAAA STTDDNTAPA ILPSKPRQLA AGGVIGIASA IFGIGGGSLT VPYLTRYGVV
MQKAVGTSAA CGLPIAIAGA LGFMLFGMQQ KIDVPNTIGF VHIYAFLGIS VMSFFTAKLG
AKVAHILSPA MLKKCFAILL TVVGCYFLYK GLR