Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2258 |
Symbol | |
ID | 5205308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2821323 |
End bp | 2821958 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640600520 |
Product | G:T/U mismatch-specific DNA glycosylase-like protein |
Protein accession | YP_001281148 |
Protein GI | 148654055 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000630044 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTTCGA CAAGAGAAAA CCATTTGCAA GAGTTGCCTA TAGAGAGTCA TCCCTTTAAG CCAGTGCTAC CCAGCAATGC TACTATCATG ATGATGGGAA CTTTTCCACC AACCCAAGAT AAGTGGGCGA TGCCATTTCA TTATCCTAAC TTCTATAATG ATATGTGGCG TATATATGGC CGGGTGTTTT TTGATGATGC AGACTACTTT CGTGTGGGCG ATGAGAAGCG CTTTGATCCT GAGCGTATTA AGGATTTTTT GAGTCAGCAC GCTATTGCCT CGTGTCCCAC CGTAAAAAAA GCCATCCGTG AGCAAGGTAA TGCTGCAGAT AAGGACTTAA CCATTGTAGA AGCGGTTAAT TTAAAGCAAG TATTGAGCCA AGTTCCAAAA GTTGACGTAC TATTTACCAC TGGCGGTAAA GCGACAGAAA TCCTGATGGA CTTATTAGCG CAAGAGCAAG GCAAAGCTAT TCCTAAATCT AAGATGCCCA AAACCAATCA GCATATAGAC TATAACTATG GTGGGCGTCA GCTTACTTTA TATAGGTTGC CATCGACCTC TCGTGCGTAT CCACTGGCTT TAGATAAAAA AGTAGCCGCT TATCGGGATT TCTTCCAAGC GATGGGGAAG CTCTAA
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Protein sequence | MSSTRENHLQ ELPIESHPFK PVLPSNATIM MMGTFPPTQD KWAMPFHYPN FYNDMWRIYG RVFFDDADYF RVGDEKRFDP ERIKDFLSQH AIASCPTVKK AIREQGNAAD KDLTIVEAVN LKQVLSQVPK VDVLFTTGGK ATEILMDLLA QEQGKAIPKS KMPKTNQHID YNYGGRQLTL YRLPSTSRAY PLALDKKVAA YRDFFQAMGK L
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