Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2238 |
Symbol | |
ID | 5205459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2781049 |
End bp | 2781804 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640600485 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001281128 |
Protein GI | 148654035 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATT CCAATAGCAT CACCATTACC ACCTACAACA TCCATAAAGG CATGTCTCCG CTCAATCGCC AAGTTGTGAC CAAGCAAATA GGCATGGCTT TAAAAGACTT ACACCCTGAT ATCTTATGTC TACAAGAAGT GCAGGGGCAA AACCTTAAAC GTATGGTCAA ATACAACGAA TACCCCAATC AGTCGCAACA TGAGTGGTTT GGTGAATATC TAAACTGCGC ACATAGCTAT GGTAAAAACT GCGAATATGA AAATGGTCAT CATGGCAATG CAGTGCTCAG TCGTCATCCA CTTGACCCCA AGCACAATGT AAATATCACT GTAAATAAGC TTGAGCAAAG AGGCGTGCTG CACTGTGAAG TGTTGCCTTT GGGATGGCCT GAGCCGGTGG TGGTGCTGTG CGCTCATTTA AATCTGTTAG AGAATGATCG TCAAAAGCAG TATAGAGCCA TTGCTGAGTA CGTCAATGAC ACCATTGATC AAAGCCGGCC CCTTATCTTA GCGGGTGACT TTAACGACTG GAAAAAAGTC TCGTGTCAAA GATTGGCGCA TGAGCTTAAT ATGACAGAAG CTTTTATGCA AAAACATAAA AAGCTGTTGC CCACTTATCC GGCTAAGCTG CCGGTACTAA GCCTTGATCG TATCTATGTA CGTAACCTAA AGGTTAAGCG GGCTTGGGTG CATAAGGGCA AGCCTTGGTC TGAGCTATCG GATCATTTAC CCATCAGTGC TGAGCTGAGC TTATAG
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Protein sequence | MINSNSITIT TYNIHKGMSP LNRQVVTKQI GMALKDLHPD ILCLQEVQGQ NLKRMVKYNE YPNQSQHEWF GEYLNCAHSY GKNCEYENGH HGNAVLSRHP LDPKHNVNIT VNKLEQRGVL HCEVLPLGWP EPVVVLCAHL NLLENDRQKQ YRAIAEYVND TIDQSRPLIL AGDFNDWKKV SCQRLAHELN MTEAFMQKHK KLLPTYPAKL PVLSLDRIYV RNLKVKRAWV HKGKPWSELS DHLPISAELS L
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