Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2232 |
Symbol | |
ID | 5205453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2772835 |
End bp | 2774628 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640600479 |
Product | sulphate transporter |
Protein accession | YP_001281122 |
Protein GI | 148654029 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0478021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGACA AGCCGACCTC ACTCATCCCG CACACAAAGC AAGACTGGCT TAAAAAGCTG ATTCCCGCTT GGGTTTCAGA CTATAGCCCC TCTCGCCTAC CCGCTGACAT TATCGCCGGT ATTGTGGTTG GTATCTTGGT CATTCCACAA AGCCTCGGCT ACGCTGTATT AGCGGGATTG CCCCCTGTGT ACGGGCTATA TGCCTCAATC GTGCCAGTTT TGGTCTACGC TTGGGTCGGC TCAAGCAGTG TACAAGCACT CGGCGCCGTT GCCATTACTG CGATCATGAC CGCCAGTAGC CTGCATGGTC TGGCAGTTGA GGGCAGTTTG CAATACATCA TGCTTGCCAG CTTATTGGCA CTGATGATGG GCGGTATATT ATGGCTCGCC GGCAAGCTGA AGCTTGGCTG GATCATGCAG TTTATTAGCC GCGGGGTATC GGCAGGCTTC GTCAGTGGGG CGGCGGTGCT TATTTTTATT AGCCAGATAA AATACTTAAC CAATATTGCA GTCAGCGGCA ACACCTTGCC AGGCTATGCC ATCTCCATGT TTAGCCAGTT AAACAGCTTA CATCTGCCCA CCTTGCTGAT TGGTGCTACC GCTTTTGTTC TGTTTTTATT AAATCGCTAT GCCAGTGCTT ATGTCTGGGA ATCTTGGCTA CCGCAAGCTC AGGCAAAATG GGCTGGACGA TTGTTTCCGC TGCTACTGGT GGTGGTAGCC ATTGTCTTAA GTTACTTGGG TCAGTGGGCA AGCCGAGGTA TTCGCACTAT TGGTGAAATC CCAAGCGGCC TACCCAGCTT CTCTGTGCCT GAATTTGAGT CATTTTCACA AGTTGCCACC TTATTACCCA CCGCAGGCTT GATGGCGCTT ATTGTGTTTA TCTCCAGCAG CTCAGTCGCC AGTACCTATG CCCGATTGCG CGGCGAGAAG TTCGATGCCA ATACTGAGCT TAGAGGACTG GGTCTGGCCA ATATTGCCGG CGGTTTTAGC CAAAGCTTTC CGGTAGCAGG CGGGTTTTCT CGCACAGCCA TCAATGTCGA TTCTGGTGCT AAGACCCCTT TGGCCAGTGT GGTCAGTGTG GTGGTCATGG TCATCGCGCT ATTGTCTTTG AGCCAAATGA TAGCGCCGCT GCCCTATGCG CTGCTCGGTG CAATGATTAT GGCCTCGATT ATTAGCCTCA TTGACTTTGC CACCTTTAAA AGCGCTTGGA AAACTGATCG TCTGGATGCA TTAAGCTTTT CAGCCACCTT TTTTGGGGTG CTGCTATTTG GGCTTAATGT GGGCTTGGTC ATCGGTATTA TTGTCTCTTT TGCTGGCTTG ATCTGGCAGT CAAGCCAGCC TCATATCGCC GTAGTAGGCC GCCTACTAGG CACCGAGCAT TTTCGTAACG TAAATCGCCA TGATGTGATT ACCTACGAGA ATTTACTGAT TATGCGGGTT GATGAAAGCT TGTTTTTTGG TAATAGTGAG TCAGTGCATA GCCAAATCCA GCAAGCGCTC AACCACCACC CTAAAGCCTC TGATTTGGTA CTGATTATGT CCTCAGTCAA CCACATTGAC TTGACGGCAC AAGAGATGCT TATCACCTTA AACCGCGAGC TGGTGGCCAA CAATAAGCGT TTGCACTACA GTTTTATTAA GGGGCCGGTG ATGGATGTTA TAGAACAAAC AGCGGTGATT ACTGAGTTAT CTGGACGTGT ATTTTTGAGT ACCGTTCAGG CCATTAACCT GCTCACCGAT GACAATCTTC ACAACGACCA GCACCCTACT GTGCAGCAAC AAGAATTTCA TTAG
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Protein sequence | MTDKPTSLIP HTKQDWLKKL IPAWVSDYSP SRLPADIIAG IVVGILVIPQ SLGYAVLAGL PPVYGLYASI VPVLVYAWVG SSSVQALGAV AITAIMTASS LHGLAVEGSL QYIMLASLLA LMMGGILWLA GKLKLGWIMQ FISRGVSAGF VSGAAVLIFI SQIKYLTNIA VSGNTLPGYA ISMFSQLNSL HLPTLLIGAT AFVLFLLNRY ASAYVWESWL PQAQAKWAGR LFPLLLVVVA IVLSYLGQWA SRGIRTIGEI PSGLPSFSVP EFESFSQVAT LLPTAGLMAL IVFISSSSVA STYARLRGEK FDANTELRGL GLANIAGGFS QSFPVAGGFS RTAINVDSGA KTPLASVVSV VVMVIALLSL SQMIAPLPYA LLGAMIMASI ISLIDFATFK SAWKTDRLDA LSFSATFFGV LLFGLNVGLV IGIIVSFAGL IWQSSQPHIA VVGRLLGTEH FRNVNRHDVI TYENLLIMRV DESLFFGNSE SVHSQIQQAL NHHPKASDLV LIMSSVNHID LTAQEMLITL NRELVANNKR LHYSFIKGPV MDVIEQTAVI TELSGRVFLS TVQAINLLTD DNLHNDQHPT VQQQEFH
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