Gene PsycPRwf_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2226 
Symbol 
ID5205281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2766774 
End bp2767538 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content46% 
IMG OID640600473 
ProductLamB/YcsF family protein 
Protein accessionYP_001281116 
Protein GI148654023 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA ATTTACCTGT TAATAAACTG CAAACTATTG ATTTGAATGC AGATGTGGCT 
GAAGGCTGTG GCCAAGATAT TGCTTTAATG AATATTATTA GCTCTGCTAA TGTCAGCTGT
GGTTTACATG CCGGCTCGTA TCAGCACATG CTTGAGACCT TAAAACTGGC CAAACAGCAT
AATGTACGAG TCGGGGCACA TCCTGGCTTT GATGACAGAG ATAACTTTGG GCGCACCGCA
CAGCAGCTAC CAGAAGAAGA GTGCCGTGCC CTGATTCATT ATCAGCTGGG TGCAGCAAAA
GCCATGTGCG ATTTGGTTGG CGTTAAGCTA AGTTATGTCA AGCCGCATGG CGCTTTATAT
AATCAGGCGG CTAAGGATGA GAAGTTGGCT AAAATTATTG TCAATGCGGT CAAAAACTTT
GATCCAAGCC TAGCAATTAT GGGGCTATCG GGTAGTTACC TAATCAGCGT CGCTAAGGCT
CATGGCTTAA CCTCAATCTC CGAAGTCTTT GCTGATCGTA ACTACGAAAG CGATGGCTCT
TTGGTTGCCC GAAGCAAAGA CAATGCACTG ATTACCGATG CGACCCAAGC AGCCCAGCAC
GCTCTACAAA TGATTACCCA AGGCATCGTG ACCAGTGTAG ATGGAGTTCA AGTACCTGTG
GAAGCCCAAA GTATTTGCCT CCATGGTGAC AGTGAGCATG CTGTGCAGTT CGCAGCTGAG
ATTAAGCAAA AGCTTGAGCA ACAAGGTATT CTCATTTGTA TCTGA
 
Protein sequence
MTTNLPVNKL QTIDLNADVA EGCGQDIALM NIISSANVSC GLHAGSYQHM LETLKLAKQH 
NVRVGAHPGF DDRDNFGRTA QQLPEEECRA LIHYQLGAAK AMCDLVGVKL SYVKPHGALY
NQAAKDEKLA KIIVNAVKNF DPSLAIMGLS GSYLISVAKA HGLTSISEVF ADRNYESDGS
LVARSKDNAL ITDATQAAQH ALQMITQGIV TSVDGVQVPV EAQSICLHGD SEHAVQFAAE
IKQKLEQQGI LICI