Gene PsycPRwf_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2224 
Symbol 
ID5205279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2765108 
End bp2765803 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content48% 
IMG OID640600471 
Productallophanate hydrolase subunit 1 
Protein accessionYP_001281114 
Protein GI148654021 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACT TGATCAGTAA TGCTGAACTC AACAGCCCTG ACCAGCCCAC TTGGCAATTA 
TGTAGTGAGA CCAATTTAAC GCTACATTTT GCTAAGCCTA TCACCCTACA AAAGCAGCAG
CTTTGCTGGG CTTTGGCTGA TCGTATTCGC AAGCTGCTGA CGGTGACCGA AGTCGTCATT
GGTATGAATA CTTTGAGCGT TTTTACCCAG CCATTAACTT TTATTGAGCT AAATGAGCTA
AAACAACACC TAACACAGCT GATAAAACAA ACAGAGGGTC AAAGCATTCA AGGCAAGCAT
ATTCAGATAC CTGTGCAATA TGGCGGCGAA TATGGCCCTG ACCTAAAGCC GATGGCTCAG
GCGTTAGGCT TGTCTGTAGA AGAGGTGGTA AAGCTACACA GCGAGGCAAT TTATACCGTT
TACTTTATTG GATTTCAGCC AGGATTTCCT TACTTGGGCG GCTTATCAGA AAAGCTTTAT
TTCCCAAGGC GAGAGACACC GCGTACTCAG GTTCCAGCAG GCTCGGTCGG TATTGGCGGT
GAACAAACGG GGGTATACCC CTTCTCCTCC CCAGGCGGTT GGCAATTGCT GGGGCGTACT
CAGATGCCGC TGTTTGATTT GACACAAAAC CCGCCGACCG CACTGAGTGC AGGAGATACT
CTGCAGTTCA CGGTGCTTGA TATTCATTAC TCGTAA
 
Protein sequence
MPNLISNAEL NSPDQPTWQL CSETNLTLHF AKPITLQKQQ LCWALADRIR KLLTVTEVVI 
GMNTLSVFTQ PLTFIELNEL KQHLTQLIKQ TEGQSIQGKH IQIPVQYGGE YGPDLKPMAQ
ALGLSVEEVV KLHSEAIYTV YFIGFQPGFP YLGGLSEKLY FPRRETPRTQ VPAGSVGIGG
EQTGVYPFSS PGGWQLLGRT QMPLFDLTQN PPTALSAGDT LQFTVLDIHY S