Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2204 |
Symbol | |
ID | 5206407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2744098 |
End bp | 2744658 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640600451 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_001281094 |
Protein GI | 148654001 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAATG CCACCAACCA CCCGCAAGCT GACGCTCCTC TTGGACCGAT TCAATCTCCT GCAGGCACCC CAAAAGTGGG CATTATTATG GGCTCGCAAT CTGATTGGGC CACCATGAGT TTGGGTGTTC AATTATTGGC CGACTTCGGT GTGCCTTTTG AGTGTGAGGT TGTCTCAGCC CATCGCACTC CAGACAAGCT ATTTGATTAT GCTAAATCTG CTAAAGACAA AGGTCTACAG GTGATCATCG CCGGCGCAGG CGGCGCCGCG CATCTGCCCG GTATGTGTGC CAGCCAAACT GAGCTGCCGG TACTTGGCGT ACCAGTGAAA TCCTCAACCC TAAGCGGCTG GGACAGCTTG TTATCAATTG TACAGATGCC AAAAGGTATT GCTGTAGGCA CCTTAGCCAT TGGCACAGCA GGTGCTTATA ACGCAGGTTT ACTGGCGATT CAGATTCTGG CTTTACAAGA TGACGCACTG GCCAAACAGC TGGTTGAGTT TCGTCAAAAT CAGACTGAAA CGGTATTGGC GAGCCCGACC CCTGGCATCA TAAACAGCTA A
|
Protein sequence | MANATNHPQA DAPLGPIQSP AGTPKVGIIM GSQSDWATMS LGVQLLADFG VPFECEVVSA HRTPDKLFDY AKSAKDKGLQ VIIAGAGGAA HLPGMCASQT ELPVLGVPVK SSTLSGWDSL LSIVQMPKGI AVGTLAIGTA GAYNAGLLAI QILALQDDAL AKQLVEFRQN QTETVLASPT PGIINS
|
| |