| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2191 |
|---|
| Symbol | rph |
|---|
| ID | 5205930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2727043 |
|---|
| End bp | 2727759 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640600438 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001281081 |
|---|
| Protein GI | 148653988 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.184109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATAG ATAACCGCGA GCTTGACCAA CTGCGCACAG TGACTTTTGA GCGTAATTAC
ACCAAACATG CTGAAGGCTC TGTACTGGTC TGCTTTGGTG ACACCAAAGT TTTGTGCACC
GCCAGTGTGG AGGCCGGTGT GCCACGTTGG TTAAAAGGAA AGGGCCAAGG CTGGGTCACC
GCAGAATACG GCATGCTACC TCGAGCCACC AATACCCGCA ACCAACGTGA AGCGGCGCGT
GGTAAGCAAT CTGGCCGCAC CCAAGAGATT CAACGTCTTA TTGGACGTAG CCTACGAGCT
ATGGTGGATT TAACCAAGCT TGGCGAGAAT ACCATCTATC TAGATTGTGA TGTGCTGCAA
GCCGACGGTG GCACCCGTAC CGCTAGTATT ACTGGGGCAG CCATCGCCCT TATTGATGCG
CTAGAGGTGC TGCAGCAAAA GAAAAAACTC AAAGCCGATC CGCTAATTGG CTTAGTGGCA
GCCGTCTCTG TCGGTGTCAA AAACGGTGAG GTATTATTGG ATTTGAACTA TGAAGAAGAC
TCCAGCTGTG ATACTGACTT GAACGTGGTA ATGACCCAAA AGGGTGAATT TATCGAAATC
CAAGGCACAG CTGAAGAGAA GCCATTTACC CGTGCAGAAG CCGACAAAAT GCTGGCCATG
GCCGAAAAAG GCATTGCCGA CTTGGTAAAA CTACAACAAA CTGCGCTGGG CTGGTAA
|
|---|
| Protein sequence | MRIDNRELDQ LRTVTFERNY TKHAEGSVLV CFGDTKVLCT ASVEAGVPRW LKGKGQGWVT
AEYGMLPRAT NTRNQREAAR GKQSGRTQEI QRLIGRSLRA MVDLTKLGEN TIYLDCDVLQ
ADGGTRTASI TGAAIALIDA LEVLQQKKKL KADPLIGLVA AVSVGVKNGE VLLDLNYEED
SSCDTDLNVV MTQKGEFIEI QGTAEEKPFT RAEADKMLAM AEKGIADLVK LQQTALGW
|
|---|
| |