| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2139 |
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| Symbol | |
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| ID | 5204598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2671098 |
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| End bp | 2671664 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600386 |
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| Product | peroxiredoxin |
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| Protein accession | YP_001281029 |
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| Protein GI | 148653936 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.441627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00203852 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGTCAA TTATTAATCA AGAAATCCCT GAGTTTTCAG CTGAAGCATT CGTTAACGGT
GAGTTCAAAA CCATCACTTC AGACGACGTA AAAGGCAAAT GGGCTATCTT CATGTTCTAC
CCAGCAGACT TCACTTTCGT TTGCCCAACT GAACTAGAAG ACATGGCCGC TCAGTATGAA
GAGCTAAAAG GCCTAGGCGT AGAAGTGTAC TCAGTATCTA CTGACACTCA TTTCACTCAC
AAAGCATGGC ACGATTCTTC AGAAGCTATT GGTAAAGTAA CTTTCCCAAT GATCGGTGAC
CCAACTGGCC GTATCACTCG TGGCTTCAAC GTAATGATTG AAGAAGCGGG TCTGGCTGAA
CGTGGTACAT TCGTCGTAGA TCCAGACGGC AAAATCCAAG TTGCTGAAAT CCATGCAGGC
GGTATCGGCC GTAGCGCAAA AGATCTAGTT CGCAAAGTAA AAGCAGCTCA ATACGTTCGT
GAAAACGACG GTGAAGTATG CCCAGCTGCT TGGGAACAAG GTCAAGCAAC GCTTAAGCCA
AGCCTAGACT TAGTCGGTAA AATCTAA
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| Protein sequence | MASIINQEIP EFSAEAFVNG EFKTITSDDV KGKWAIFMFY PADFTFVCPT ELEDMAAQYE
ELKGLGVEVY SVSTDTHFTH KAWHDSSEAI GKVTFPMIGD PTGRITRGFN VMIEEAGLAE
RGTFVVDPDG KIQVAEIHAG GIGRSAKDLV RKVKAAQYVR ENDGEVCPAA WEQGQATLKP
SLDLVGKI
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