| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2124 |
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| Symbol | |
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| ID | 5205415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2649884 |
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| End bp | 2650792 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600366 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001281014 |
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| Protein GI | 148653921 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.035757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACC GCTATTCTGA CTTTAAAACC CAACTGCAAG GCTCAATGGT TGCCTTAGTA
ACCCCAATGA AAGCCAATGG CGAAGTAGAT TACCCGCGCT TAGCCGATCT GATTGACTGG
CAAATTGAAC AAGGCACTCA CTGCTTGGTT GCCGTAGGTA CCACCGGAGA GTCAGCCACG
TTATCTATGC AAGAACACAG TGATGTTATC CACTTTTTTG TGAAACACGT AAACGGCCGA
GTGCCCGTAA TAGCAGGTAC TGGTGCCAAC AATACTCAAG AGGCAATTCA CCTAACCTCT
GAGGCAAAAG CGGCCGGCGC CGATTGCGCC CTTTTAGTAG CACCTTATTA TAATAAGCCC
ACTCAAGAGG GGTTATACCA GCACTATAAA GCGATATCTG AGGCTGTAGA TATGCCGCAA
ATGCTTTATA ATGTGCCAGG GCGTACTGTG GTCGATATTG CGCAAGAGAC CGTAGAGCGT
TTGGCAGATT TTGACAACAT TGTCGCCATA AAAGATGCCA CCGGCTCGGT AGAACGTGGC
AAGCTATTAA TTGACGCTTT AGGTGATCGT ATCGTGGTGT TATCAGGTGA TGATGGCACG
GCGCTAGAGC TGATGAAACA TGGTGCCAAA GGTAATATAT CAGTAACGGC TAACATTGTG
CCAAAAGCGA TGAGTGATGT ATTTAGTGCC GCCTTAAAAG GTGACTTTGA AACGGCCAAA
AAGGTGCATG ACAGCATTGA GCCTTTGCAC AAACTTATGT TCGTTGAATC AAGCCCCATT
CCGGTCAAAT ATGCTTTAAA TAAAATGGGC AAAATTGAGA AAGGCATCCG CTTACCTATG
GTGTGGTTAA ATGAGAAGTT TCATGACCAA GTGGACGCCG GTTTACGAGC TGCCGGTTTG
ATTGACTAG
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| Protein sequence | MSNRYSDFKT QLQGSMVALV TPMKANGEVD YPRLADLIDW QIEQGTHCLV AVGTTGESAT
LSMQEHSDVI HFFVKHVNGR VPVIAGTGAN NTQEAIHLTS EAKAAGADCA LLVAPYYNKP
TQEGLYQHYK AISEAVDMPQ MLYNVPGRTV VDIAQETVER LADFDNIVAI KDATGSVERG
KLLIDALGDR IVVLSGDDGT ALELMKHGAK GNISVTANIV PKAMSDVFSA ALKGDFETAK
KVHDSIEPLH KLMFVESSPI PVKYALNKMG KIEKGIRLPM VWLNEKFHDQ VDAGLRAAGL
ID
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