| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2123 |
|---|
| Symbol | |
|---|
| ID | 5205414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2648208 |
|---|
| End bp | 2649467 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640600365 |
|---|
| Product | saccharopine dehydrogenase (NAD(+), L-glutamate-forming) |
|---|
| Protein accession | YP_001281013 |
|---|
| Protein GI | 148653920 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3268] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0383643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCTG ATACTGCCTC ACAGGACAGC CGTCCCTATG ACATCATACT TTACGGTGCC
ACCAGTTTTG TTGGTCAATT GACTGCCGCT TACTTACATC AGTTTTTATC ACAGGCTAAT
AAGGATAAAG CCGACTCAGT CAGATGGGCC ATCGCCGGAC GTAATCAAGA TAAGTTAACT
CAGGTCAAAG ATCAGATGGG CGATAGCAAT TTGCCCATTT TAATTGCCGA CAGTGAAGAC
GCACAAAGCT TAGATGCGCT GGCCTCTAAA AGCCGCGTAA TTATCTCAAC AGTTGGTCCT
TATCTTAAAT ATGGTGAGCC ATTAATTAAA GCCTGTGTGG ACAATGGTAC CGATTATGTT
GACTTAACCG GCGAGGCTAT TTTTATCAAA GCCATGCTTG ATAAATATCA GTCTGCCGCT
CAAGCGTCGG GCGCTCGCAT TGTTAACTCA TGTGGCTTTG ACTCTCTGCC TTCTGATTTG
GGCGTGCTTT TTACCCAAAA TTATGCCCAG CAGACGCTAA ACGCGCCTTG TCATACTATT
CATATGCGCG TCAAAGCAGC CAAAGGCGGC CTGTCAGGCG GTACGTTTGC TTCGATGGCC
ACCATATTAG AGGAAGTCGG TACCAATAAG GCCGCGCGCA AATTATTGGC CAACCCTTAT
GTGTTAAATG ATGACCCAAA GCGCCCTAAT ATTCGCCAAA ATAGTGTAAA AGTACCTGAG
TGGGATGAGC AGAATAAGCG CTGGCTGGCA CCATTTATCA TGGAGTCTAT CAATACCCGC
GTGGTACATC GCAGCAACCA GCTACGTGGC TATGAGTATG GCCGCGACTT TAAATACGAT
GAAGCGATGT GGATGCCATC TGGAATAAAA GGTCGCTTGC TAAGTTATGG CTTAGTGGCG
GGTATGGCCG GATTTGCTGC AGGCATGATA TTTAAGCCCA CTCGTGATTT GATTAACGAC
AAGCTGTTAC CACAATCTGG TGAAGGTCCA AATAAACAAG AGCGAGACGA GGGTTACTTT
GATATTCGCT TCTTTGGCGA GGGCAGTCAT GGCAAGCAGG TGTTGACCAA AGTAACCGGC
GATAAAGATC CTGGATACGG CAGCACTTGC CAGATGTTAT CTCAAAGTGC GCTTTGTTTA
CTACAAGATA TCTCAAAGCA AGAAATAACA GGTGGGTTTT GGACGCCGGC GTCATCAATG
GGCGAAAGAT TAATCGAGCG TCTACAGGCG CATGCTGGTA TCACATTTGA GGTGCTGTAA
|
|---|
| Protein sequence | MSSDTASQDS RPYDIILYGA TSFVGQLTAA YLHQFLSQAN KDKADSVRWA IAGRNQDKLT
QVKDQMGDSN LPILIADSED AQSLDALASK SRVIISTVGP YLKYGEPLIK ACVDNGTDYV
DLTGEAIFIK AMLDKYQSAA QASGARIVNS CGFDSLPSDL GVLFTQNYAQ QTLNAPCHTI
HMRVKAAKGG LSGGTFASMA TILEEVGTNK AARKLLANPY VLNDDPKRPN IRQNSVKVPE
WDEQNKRWLA PFIMESINTR VVHRSNQLRG YEYGRDFKYD EAMWMPSGIK GRLLSYGLVA
GMAGFAAGMI FKPTRDLIND KLLPQSGEGP NKQERDEGYF DIRFFGEGSH GKQVLTKVTG
DKDPGYGSTC QMLSQSALCL LQDISKQEIT GGFWTPASSM GERLIERLQA HAGITFEVL
|
|---|
| |